Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F002218355.1_202017-07-14] 2,879 sequences; 39,272,241 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq1739 185 1e-41 seq2866 104 3e-17 seq1669 89.7 6e-13 >seq1739 Length=196179 Score = 185 bits (204), Expect = 1e-41 Identities = 1126/1781 (63%), Gaps = 53/1781 (3%) Strand=Plus/Minus Query 104222 CCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTC 104281 |||||| ||||| ||||||| || || | ||||| || || ||||||| ||| Sbjct 127155 CCACAGCACATGATCATGCGTGTTGCTGTAGGTATCTGGGGTGACAACATTGAGCGAGTC 127096 Query 104282 TTGGAGACATACGACAAGATGTCCCAAGGTA--TGTTCATTCACGCAACACCAACCCTCT 104339 | || || ||| || ||||| || | | |||| ||||| | || || || | Sbjct 127095 ATCGAAACCTACAACCTTATGTCT--AGCAAATTCTTCACACACGCCTCCCCGACGCTTT 127038 Query 104340 TCAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGG 104399 |||| || || ||||| | || |||| |||||||| | | | ||||| | Sbjct 127037 TCAACGCCGGCACACCGCAGGCTCAGTTGTCGTCATGCTTCCTGGTTGATATGAAGGACG 126978 Query 104400 ACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTG 104459 || || | || ||||| | || || | | ||||| ||||| ||| ||||| Sbjct 126977 ACAGCATTGAGGGAATCTACGACACCCTCAAGACTTGTGCCATGATCTCCAAGATGGCTG 126918 Query 104460 GGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTAT-TCGGGGG-AC 104517 | ||||| || | || ||||| | | |||| | ||| ||| ||| || || Sbjct 126917 GCGGTATCGGTCTCAACGTCCATCGCATCCGTGCCACTGG--CTCCTATATCGCCGGTAC 126860 Query 104518 AAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTA 104577 || || || | || ||| |||| ||||| || || || ||| |||||| ||||| Sbjct 126859 CAACGGCACCTCGAACGGCATTGTTCCCATGCTGCGTGTGTTCAACAACACAGCTCGCTA 126800 Query 104578 TGTAAATCAAGCTGGGCGTCGAAAG----GGATCTATCGCAGTCTATCTTGAGCCATGGC 104633 || | || | ||| | | | | || | | || |||| |||||||| |||| Sbjct 126799 CGTCGACCAGGGTGG-CAACAAGCGCCCCGGTGCCTTTGCCATCTACCTTGAGCCGTGGC 126741 Query 104634 ACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGT 104693 |||| ||| || | |||||||| || | | ||||| || | |||||| || Sbjct 126740 ACGCAGATGTCTTCGAGTTCCTCGACCTAAGGAAGAACCACGGAAAGGAGGAGATTCGTG 126681 Query 104694 GCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGA 104753 ||| || || ||| |||||| ||||| || ||||| ||||||||| | |||||| | | Sbjct 126680 CCCGTGACCTGTTCCTCGCTCTTTGGATCCCTGATCTGTTCATGAAGCGCGTTGAGAAAA 126621 Query 104754 GTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGGGTG 104813 ||| | ||| | | | || || || || ||||| ||| | || | |||| Sbjct 126620 ACGGCGACTGGACCTTGATGTGCCCGAACGAGTGCCCTGGCCTCGCGGACTGCTACGGTG 126561 Query 104814 AGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGC--GACGGT 104871 | ||||| || || || || ||||| ||| | | ||| || | | || |||| | Sbjct 126560 AAGAGTTCGAGGCTCTGTATGAGAAGTATGAGCAGGCCGGTAAGG-GTC-GCAAGACGAT 126503 Query 104872 GCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCAT 104930 | || | || | ||| | | || || || |||| || |||||||||| || | Sbjct 126502 -CAAGGCCCAGAAACTTTGGTATTCCATCCTGGAGGCTCAGACTGAGACTGGTAACCCGT 126444 Query 104931 ACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCA 104990 |||||| ||||| || ||| |||| ||||| || || ||||| | ||| || Sbjct 126443 TCATGCTGTACAAGGATCACTGCAACCGCAAGAGCAACCAGAAGAACCTTGGTACCATTC 126384 Query 104991 AGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGT 105050 || ||||| ||||| || || || | || | | | | || ||| ||||| | Sbjct 126383 GCAGCTCCAACCTCTGCACGGAGATTATCGAGTACTCTGCCCCTGACGAGGTTGCTGTAT 126324 Query 105051 GTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGAT--CCAGAGACAAAGACATTTGA 105108 | ||||| || || | ||||| ||| ||| || || ||| | | || || || Sbjct 126323 GCAACCTTGCTTCCCTGGCTCTGCCCCAGTTCGTCGACTACCACA-AGGGTGA-ATACGA 126266 Query 105109 TTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTATTGA 105168 | ||| |||||||| || || || || || ||||| |||| | || || Sbjct 126265 CTTTGAGAAACTCCATGAGGTCACTCAAGTCGTTGTTCGCAACCTCAACAAGATCATCGA 126206 Query 105169 TAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGG 105228 || | |||||||| || || || || || ||| | ||| | || || || Sbjct 126205 AGTCAACTACTACCCCGTCCAGGAGGCACGCAACAGCAACATGCGCCACAGGCCTATCGG 126146 Query 105229 TCTCGGTGTTCAGGGTCTCGCGGATGTATTCATT---CTTTGTCGCCACGCATTTGATTC 105285 ||| || || || ||||| || || | ||| || || ||| | | || || || Sbjct 126145 TCTGGGCGTCCAAGGTCTGGCTGACGCTTTCCTTGCACTCCGTCTGC---CTTTCGAGTC 126089 Query 105286 CGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTCTTGA 105345 || || || |||| | || ||||||||||| || ||||| ||||| Sbjct 126088 TCCTGAGGCTCGTGATCTCAACAAGAAGATCTTTGAGACCATCTACCACGCTGCTCTGAC 126029 Query 105346 GGCGAGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGC 105405 || || || | ||||||| | |||||||| || | ||||| ||||| | Sbjct 126028 TGCCTCTTGCAAGCTTGCAGAGGAGCAGGGTCCATACTCGACATACGAGGGATCTCCTGT 125969 Query 105406 TTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAG-CTTCA-----CTA 105459 |||||| || | || || | || |||| |||| || |||| ||||| || Sbjct 125968 TTCACAGGGAATTCTCCAGTACGACATGT-GGAACGT-----CAAGCCTTCAGACCTCTG 125915 Query 105460 CGACTGGGAAGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCCTCAT 105519 |||||||| |||||||||| ||||||| | | ||| | || ||||| | ||| | Sbjct 125914 GGACTGGGACGCTCTCAAGGCCAACATCAAGCAACATGGTGTCCGCAACAGCTTGCTCGT 125855 Query 105520 GGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACC 105579 || || ||||| ||||| ||| |||||||| | || || || || |||||||| || Sbjct 125854 TGCCCCCATGCCTACAGCTAGCACGTCACAAATCCTTGGCAACAACGAGTGCTTTGAGCC 125795 Query 105580 CTACACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAA--- 105636 ||| || | ||||| || | | | || || || ||||| | | ||||| Sbjct 125794 CTATACTTCCAACATTTACCAACGCCGTGTGCTTGCCGGCGAGTTCCAGGTAGTCAACCC 125735 Query 105637 CAAGCATCTCGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAAGGATCT 105696 | | ||| |||| || ||| ||||||| ||||| | || |||||| | | Sbjct 125734 CTGGTTGCTCAAGGAT---CTGGTCGAGCTTGGTCTGTGGTCAGACGACATGAAGAACCG 125678 Query 105697 CATGGTGAAAGCGGGTGGTTCCATTCAAAATATTGTGGATATTCCAAATGAAATTAAGAA 105756 || | | ||| || ||||| || || |||| || || | || | ||||| Sbjct 125677 TATCATCGCCGAGGGAGGCTCCATCCAGAACATTGCCAGCATCCCTGAGGATACCAAGAA 125618 Query 105757 GTTGTACCGCACAGTTTGGGAAATCAAGATGAAGGA-TGTCATTGACATGGCCGCAGATC 105815 | | ||| || |||||||| ||| | | | | ||| || | |||||||| || | Sbjct 125617 GCTCTACAAGACTGTTTGGGAGATCTCG-CAACGTACCGTCGTTCAGATGGCCGCTGACC 125559 Query 105816 GTGGTCGCTTCATTGATCAAAGTCAAAGT--ATGAATCTCTTCATGGAAAGTCCAACGAT 105873 ||||| ||||||||| | |||| ||| | || || |||| || || || Sbjct 125558 GTGGTGCCTTCATTGACC--AGTCCCAGTCGCTCAACATCCACATGCGCGACCCGACCAT 125501 Query 105874 GTCCAAGCTCTCTTCTATGCACATGTACAGTTGGAAGAAGGGTCTCAAAACGGGGATGTA 105933 | |||| || | || ||||| | | | |||||| |||||||| || || ||||| Sbjct 125500 GGGCAAGATCACCTCGATGCATTTCACCGGCTGGAAGCTTGGTCTCAAGACCGGCATGTA 125441 Query 105934 TTACCTCCGATCTAAGGCAAAGGCGCGCCCAATTCAGTTCA 105974 ||||| || | ||||| || | || |||||||||| Sbjct 125440 CTACCTGCGGACGCAGGCAGCCGCCCAGCCGATTCAGTTCA 125400 >seq2866 Length=227592 Score = 104 bits (114), Expect = 3e-17 Identities = 161/226 (71%), Gaps = 8/226 (4%) Strand=Plus/Minus Query 94734 AGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTT---GATACAAAGTC 94790 ||| || || || | ||||| || || |||||| ||| |||| | || | ||||| Sbjct 149255 AGTCCCCTGCATCCGCAAGAAGGCCGACTGGGCTCTGAGGTGGATCACCGACAAGAAGTC 149196 Query 94791 GCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGT-GTTGAGGGTATCTTCTTCTCTG 94849 ||||||| ||| || |||| || || ||| || ||||||||||||||| | Sbjct 149195 AA---CCTTTGCCACGCGCCTGATCGCTTTCGC-TGTCGTCGAGGGTATCTTCTTCAGCG 149140 Query 94850 GTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCT 94909 || | || | | || | |||||||||||||| || || ||||| ||||| |||| Sbjct 149139 GTGCTTTTGCCTCCATCTTCTGGCTCAAGAAGCGTGGCCTGATGCCTGGTCTGACTTTCT 149080 Query 94910 CCAACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 94955 |||||||||| ||||| ||||| ||||| || ||| || ||||| Sbjct 149079 CCAACGAGCTCATCTCGCGTGATGAGGGTCTACACACCGACTTTGC 149034 >seq1669 Length=415349 Score = 89.7 bits (98), Expect = 6e-13 Identities = 211/317 (67%), Gaps = 4/317 (1%) Strand=Plus/Plus Query 9704 GCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGCGACTTCAAAGAGA 9763 ||||| || || || ||||||| |||||| || | || ||| || | | || || Sbjct 76010 GCATCGATTTCGTCGATGAAGATGATGCAAGGAGCGTGTTTGCGCGCCTCCTTGAACAGG 76069 Query 9764 TCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTG--CGGCGGAAC 9821 || || ||||| || || ||||| |||||||| || || || | || | | || Sbjct 76070 TCTCGCACACGAGACGCACCGACACCGACAAACATTTCGACGAACTCTGAACCACTGACG 76129 Query 9822 ATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCG 9881 | || |||||| || || ||||| || | || ||| | ||| |||||||||| Sbjct 76130 CT--GAAGAAGGGCACGCCCGACTCACCGGCCGTAGCCTTGGCCAAAAGCGTCTTACCCG 76187 Query 9882 TACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCCACTTCCAAAGTATC 9941 | ||||| ||| | || | |||||| ||||||||||||||||| | || | | Sbjct 76188 TTCCTGGAGGACCGGACAGAATGGCACCACGTGGAATCTTGGCGCCCAACCGAACGAACT 76247 Query 9942 TCTCAGGTTGCTTAAGAAAATCCACAATTTCTTCCAATTCATCTTTGGCGGCGTCAATCC 10001 |||| ||| ||| || || ||||| ||| | | |||| ||||| ||||| | Sbjct 76248 TCTCCGGTGTCTTCAGGAAGCTCACAAATTCGACAATTTCAAGCTTGGCCTCGTCAGCAC 76307 Query 10002 CCTCAACATCGGTAAAC 10018 | | || |||| |||| Sbjct 76308 CGGCTACGTCGGCAAAC 76324 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583239809901960