Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F002218425.1_202017-07-14] 900 sequences; 42,437,008 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq748 168 7e-37 seq44 131 2e-25 seq156 125 7e-24 seq91 105 7e-18 >seq748 Length=11612 Score = 168 bits (186), Expect = 7e-37 Identities = 271/384 (71%), Gaps = 4/384 (1%) Strand=Plus/Plus Query 116982 AGAAGGCCGAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCC 117041 |||||||||| ||||| ||| | |||||| ||| || || | |||| | | ||||| Sbjct 7115 AGAAGGCCGACTGGGCTCTGAGGTGGATCACCGACAAGAAGTCAACCTTTGCCACGCGCC 7174 Query 117042 TGGTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTT 117101 || | || ||||| | ||||||||| ||||||| || ||| ||| |||| || | Sbjct 7175 TGATCGCTTTCGCTGTCGTCGAGGGTATCTTCTTCAGCGGTGCTTTTGCCTCCATCTTCT 7234 Query 117102 GGCTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGG 117161 |||||||||| || ||||| ||||| || ||||||||| ||||||||||||||| | | Sbjct 7235 GGCTCAAGAAGCGTGGCCTGATGCCTGGTCTGACTTTCTCCAACGAGCTCATCTCGCGTG 7294 Query 117162 ACGAGGGTCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTGGTGCAGCGACCGA 117221 | |||||||| || ||||||||||||| | |||||| || || | | || | Sbjct 7295 ATGAGGGTCTACACACCGACTTTGCCTGTCTCCTGTTCTCGCTCCTGAACAACAGGCCCA 7354 Query 117222 GCGCGGCGCGCGTCAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTCA 117281 | || | || | |||||| || ||| || ||| || ||||| || || | Sbjct 7355 ACAAGGAGGTTGTGAAGGAGATTGTTGTCGATGCTGTCAAGATTGAGCAAGAGTTTCTTA 7414 Query 117282 CCGAAGCGCTGCCGGTGCG-TCTGCTGGGACTCAATTGCGAAAC-GATGTCGCAATACAT 117339 | || ||| |||| |||| || ||||| | || || || | |||| ||| ||||| Sbjct 7415 CGGAGGCGTTGCC-CTGCGCCCTCCTGGGCATGAA-CGCCAACCTGATGAAGCAGTACAT 7472 Query 117340 CGAGTTCGTCGCCGACAGGCTGCT 117363 ||||| ||||| ||||| || || Sbjct 7473 TGAGTTTGTCGCTGACAGACTTCT 7496 Score = 149 bits (164), Expect = 6e-31 Identities = 208/286 (73%), Gaps = 7/286 (2%) Strand=Plus/Plus Query 116637 TGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTGT 116696 |||||| |||||||| ||||||||||| || |||||||| | ||| ||| | || ||| Sbjct 6699 TGTGGCAGATGTACAAGAAGGCCGAGGCCTCATTCTGGACGGCCGAAGAGATTGATTTGT 6758 Query 116697 CCAAGGA-CACGAGCGACTGGGAGCGCTTGAAC---GACAACGAGCGCCATTTCATCAAG 116752 ||||||| | | | ||||||| | | | | || | || | |||||| Sbjct 6759 CCAAGGATCTCCA-CGACTGGAACAACAAGCTCACAGATGATGAAAAGTACTTCATCTCA 6817 Query 116753 CACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGT 116812 ||| | || || || |||||||| || ||||||||||||||||| || || ||||| Sbjct 6818 CACATCCTTGCATTCTTCGCCGCTTCTGATGGCATCGTCAACGAGAACCTCGTTGAGCGA 6877 Query 116813 TTC-GCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCAT 116871 ||| || | || || ||| | ||||||| || |||||||||||||| |||||| || Sbjct 6878 TTCAGCGC-CGAAGTCCAGATTCCCGAGGCCCGTTGCTTCTACGGCTTCCAGATCATGAT 6936 Query 116872 GGAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTAC 116917 ||||||| | ||||| || | || ||| ||| |||||||||||| Sbjct 6937 GGAGAACATTCACTCCGAGACTTACTCGCTCCTGATCGACACGTAC 6982 >seq44 Length=145030 Score = 131 bits (144), Expect = 2e-25 Identities = 158/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || ||||||||||| || |||||| | || || || | | | Sbjct 41857 ATGCAGATCTTCGTCAAGACCCTCACGGGCAAGACTATCACCCTTGAGGTGGAGTCGAGC 41916 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | ||||| || || | ||||| ||||| |||||| |||||||| Sbjct 41917 GACACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCAG 41976 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || | |||| || ||||| ||||| || |||| | ||||| |||||||||| Sbjct 41977 CAGCGCTTGATCTTTGCCGGCAAGCAGCTTGAGGACGGCAGGACCCTGTCCGACTACAAC 42036 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904 |||||||||||| ||| || || || ||| |||| Sbjct 42037 ATCCAGAAGGAGAGCACCCTCCACCTCGTGCTGCG 42071 >seq156 Length=58642 Score = 125 bits (138), Expect = 7e-24 Identities = 156/211 (74%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| ||||| || ||||| || |||||||||||||| |||| || ||| | | Sbjct 27635 ATGCAAATCTTCGTCAAGACGCTTACCGGCAAAACCATCACACTCGAAGTTGAATCTTCA 27694 Query 40750 GACAGCGT-GCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | |||| |||| ||| |||| ||||| ||||| ||||| | ||||| Sbjct 27695 GACACAATCGACAACG-TCAAATCAAAGATTCAAGACAAGGAGGGTATCCCGCCTGACCA 27753 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||||| | |||| |||||||| |||||||| || | || ||||| || ||||| Sbjct 27754 ACAACGTTTGATCTTTGCGGGCAAGCAGCTGGAGGATGGACGAACCCTGTCTGATTACAA 27813 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTG 40899 || ||||||||| | || ||||| || ||| Sbjct 27814 TATTCAGAAGGAGTCGACTCTGCACCTTGTG 27844 Score = 111 bits (122), Expect = 2e-19 Identities = 147/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| ||||| ||||| ||||| || || ||| | || ||||| || || Sbjct 27179 ATGCAGATTTTCGTCAAAACCCTCACTGGCAAGACGATTACCTTGGAGGTCGAGTCCTCC 27238 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 || | | | | | | ||| || || | ||||| ||||| || || ||||||| Sbjct 27239 GATACCATCGACAATGTAAAGTCGAAGATCCAGGACAAGGAGGGTATTCCTCCGGACCAA 27298 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 ||||| || || | ||| || || ||||| || |||| || ||||| |||||||||| Sbjct 27299 CAACGCCTTATTTTCGCTGGAAAGCAGCTTGAGGACGGTCGGACCCTTTCCGACTACAAC 27358 Query 40870 ATCCAGAAGGAGGCCACGCTGCAT 40893 ||||| |||||| ||| || ||| Sbjct 27359 ATCCAAAAGGAGAGCACCCTCCAT 27382 Score = 96.9 bits (106), Expect = 4e-15 Identities = 140/195 (72%), Gaps = 2/195 (1%) Strand=Plus/Plus Query 40712 TCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGCA-AACGCTCAAG 40770 |||| ||||| ||||||||| |||| || || | | ||| | | | | |||| ||||| Sbjct 26973 TCACTGGCAAGACCATCACCCTCGAGGTGGAGTCTAGCGATACCATCGACAACG-TCAAG 27031 Query 40771 GAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGC 40830 || || | ||||| ||||| ||||| ||||||| || || || || | || ||| Sbjct 27032 TCGAAGATCCAGGACAAGGAGGGTATCCCTCCGGACCAACAGCGTCTTATTTTTGCCGGC 27091 Query 40831 AAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTG 40890 || || || || |||| || || || |||||||||||||||||||||| || || Sbjct 27092 AAGCAACTCGAGGACGGTCGGACACTTTCCGACTACAACATCCAGAAGGAGAGTACTCTC 27151 Query 40891 CATCTAGTGTTGCGC 40905 || || ||| | ||| Sbjct 27152 CACCTCGTGCTCCGC 27166 Score = 95.1 bits (104), Expect = 1e-14 Identities = 145/204 (71%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || | |||||||| |||||||| | || ||||| | | Sbjct 27407 ATGCAGATCTTCGTCAAGACTTTGACGGGCAAGACCATCACGTTGGAGGTCGAGTCTTCA 27466 Query 40750 GACA-GCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | || || | | || || | | | ||||| ||||| || || ||||||| Sbjct 27467 GACACGATTGACAATGTTAAATCCAAGA-TCCAAGACAAGGAGGGTATTCCTCCGGACCA 27525 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 || ||||| |||| ||| || || ||| |||| || | ||||| || ||||||||| Sbjct 27526 ACAGCGACTGATCTTCGCTGGAAAGCAGTTGGAGGATGGACGCACGCTGTCCGACTACAA 27585 Query 40869 CATCCAGAAGGAGGCCACGCTGCA 40892 |||||| ||||| | || ||||| Sbjct 27586 CATCCAAAAGGAATCTACTCTGCA 27609 >seq91 Length=239839 Score = 105 bits (116), Expect = 7e-18 Identities = 132/181 (73%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 40699 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTG 40758 ||||| || || || || ||||| ||||||||| | || ||||| || | |||| | Sbjct 18670 TTCGTGAAGACTCTGACTGGCAAGACCATCACCTTGGAGGTCGAGTCCTCGGACACGATC 18611 Query 40759 CAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTC 40818 | | | ||| || |||| ||||| ||||| || ||| | ||||| || || || Sbjct 18610 GACAATGTGAAGTCCAAGATTCAGGACAAGGAGGGAATTCCCCCTGACCAACAGCGTCTT 18551 Query 40819 ATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAG 40878 |||| || ||||| |||||||| |||| || || ||| ||||||||||||||||||| Sbjct 18550 ATCTTTGCTGGCAAGCAGCTGGAGGACGGCCGTACTCTCTCCGACTACAACATCCAGAAG 18491 Query 40879 G 40879 | Sbjct 18490 G 18490 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515213403784000