Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F002218425.1_202017-07-14] 900 sequences; 42,437,008 total letters Query= NC_028461.1 Length=127011 Score E Sequences producing significant alignments: (Bits) Value seq122 109 4e-19 >seq122 Length=296685 Score = 109 bits (120), Expect = 4e-19 Identities = 267/400 (67%), Gaps = 10/400 (3%) Strand=Plus/Minus Query 30062 ACGTAAAACTG---ACACATGGCGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTG 30118 ||||||||||| | ||||| |||||||| || || |||| || | ||| ||| Sbjct 295760 ACGTAAAACTGCGCAAACATG---TGGCACGGCGGCAGGACCATAAGCTTGAGGTCCTTG 295704 Query 30119 GGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACG 30178 |||||||| || | | | ||||| | ||| | ||||| | | || || |||| Sbjct 295703 GGGTTCCAAGCACTAAGAACCATGCGGCGGTCGTACGGGTTCGTGCGGAGCTTGTGCACG 295644 Query 30179 GCGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTACTCT 30238 | | ||||| || || ||| |||| ||||||||| ||| ||||| || Sbjct 295643 ACCTCGGCGAGCTGGTCGACGCCCTGGCCCGTGTAGTCTGCGTGGCAGTCGGTGTATTCG 295584 Query 30239 GCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGC 30298 || || || || | ||| ||||| ||||| || || |||||||| ||| | || | |||| Sbjct 295583 GCGCCAAAGTGGCGCCATTGGAAGCCGTAGACGGGGCCCAGGTCGCCCACCTCGCGGTGC 295524 Query 30299 TCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCC- 30357 | || ||| | ||||| || || | | |||||| ||||||||||||| ||||| Sbjct 295523 TGCAATCCCAGCCCGTCCAGGAACTCACGGCTGCCGTTGCCGTCCCAGATCTTGACCCCG 295464 Query 30358 -CTTCTCAGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCA 30416 | || | || | ||| | | || | || ||||||||||||||||| | Sbjct 295463 GCGTCGCTCAG-GGGCTTCGCCG-ACGTCGCGCCCGACACGAACCACAGCAGCTCGAGGA 295406 Query 30417 CGACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGG 30456 |||||| | | ||||| | ||| ||||| || || || Sbjct 295405 TCACGGCCCGCGAGAAGACGCGCTTCGTCGTCAGCAGAGG 295366 Score = 98.7 bits (108), Expect = 8e-16 Identities = 155/222 (70%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 29821 CCTGTTTATCCTCAGTGTGGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAGTCTTCAGCGG 29880 |||||| ||| || ||| || || || ||||| | ||| ||||| || || | Sbjct 296082 CCTGTTGATCTCGAGCTCGGGGAACGGCCTCGGCTCGCGCTCCAGCTGCATCCGGAGTGC 296023 Query 29881 TTCCACGTTATCCAGGTAGACGTGAGCGTCTCCCAGGTTGTGGACAAACTCTCCCGGTTC 29940 || |||| || |||||||||||| || |||| | ||| | | || || | Sbjct 296022 GTCGACGTGGTCGGCGTAGACGTGAGCATCGCCCATGACGTGCGTCAGCGACCCGGGCAC 295963 Query 29941 TAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGG 30000 ||| || ||| | | || ||||||| ||| || || | ||||||||| ||||| ||||| Sbjct 295962 TAGACCCGTGGCACGCGCAATCATGTGCGTCAGCAGTGCGTAGCTGGCAATGTTGAAGGG 295903 Query 30001 TACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACA 30042 || || || |||||||| | |||| |||||||||||| || Sbjct 295902 CACGCCTAGGCCCATGTCGCAGGACCGCTGGTAGAGCTGGCA 295861 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406305943282800