Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F002218425.1_202017-07-14] 900 sequences; 42,437,008 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq156 179 9e-40 seq44 122 2e-22 seq20 114 3e-20 seq758 109 1e-18 >seq156 Length=58642 Score = 179 bits (198), Expect = 9e-40 Identities = 173/222 (78%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||| || | |||||| | ||| ||||| ||||| ||||||| ||||| |||| || || Sbjct 27628 ACGCAGACGCAGGACCAAGTGCAGAGTAGATTCCTTTTGGATGTTGTAGTCGGACAGCGT 27569 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | ||||| || | |||||| ||||||||||| ||||| |||||||| || |||||||| Sbjct 27568 GCGTCCATCCTCCAACTGCTTTCCAGCGAAGATCAGTCGCTGTTGGTCCGGAGGAATACC 27509 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 ||||||||||||||||| || ||| || || |||||||| | || || || || Sbjct 27508 CTCCTTGTCTTGGATCTTGGATTTAACATTGTCAATCGTGTCTGAAGACTCGACCTCCAA 27449 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 |||||| ||||||||||||||||| || | ||| | ||||| Sbjct 27448 CGTGATGGTCTTGCCCGTCAAAGTCTTGACGAAGATCTGCAT 27407 Score = 149 bits (164), Expect = 1e-30 Identities = 166/222 (75%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||| | || |||||||| ||||| || || || || | ||||||||| | || || Sbjct 27856 ACGAAGACGGAGCACAAGGTGCAGAGTCGACTCCTTCTGAATATTGTAATCAGACAGGGT 27797 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 || ||||| || |||||||| || || ||||| | ||||||||||| ||||| ||||| Sbjct 27796 TCGTCCATCCTCCAGCTGCTTGCCCGCAAAGATCAAACGTTGTTGGTCAGGCGGGATACC 27737 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 ||||||||||| |||||| || || ||||| |||||||| | ||| || || | Sbjct 27736 CTCCTTGTCTTGAATCTTTGATTTGACGTTGTCGATTGTGTCTGAAGATTCAACTTCGAG 27677 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| || ||||| || | || || | ||| | |||||| Sbjct 27676 TGTGATGGTTTTGCCGGTAAGCGTCTTGACGAAGATTTGCAT 27635 Score = 143 bits (158), Expect = 6e-29 Identities = 159/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| | ||||| ||| || ||||||| ||||| |||| | || | || || Sbjct 27390 AGGACCAAATGGAGGGTGCTCTCCTTTTGGATGTTGTAGTCGGAAAGGGTCCGACCGTCC 27331 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| |||||||| ||||| ||||||||||| || |||||||| |||||||| Sbjct 27330 TCAAGCTGCTTTCCAGCGAAAATAAGGCGTTGTTGGTCCGGAGGAATACCCTCCTTGTCC 27271 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||| ||| |||||||| || |||| || || || || || |||||| Sbjct 27270 TGGATCTTCGACTTTACATTGTCGATGGTATCGGAGGACTCGACCTCCAAGGTAATCGTC 27211 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| || | ||||| | ||| | ||||| Sbjct 27210 TTGCCAGTGAGGGTTTTGACGAAAATCTGCAT 27179 Score = 96.9 bits (106), Expect = 8e-15 Identities = 134/188 (71%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || || ||||||||||| || || |||| ||||| |||| | || | || || Sbjct 27162 AGCACGAGGTGGAGAGTACTCTCCTTCTGGATGTTGTAGTCGGAAAGTGTCCGACCGTCC 27103 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || || ||||| || || || ||||| || |||||||| || || ||||| |||||||| Sbjct 27102 TCGAGTTGCTTGCCGGCAAAAATAAGACGCTGTTGGTCCGGAGGGATACCCTCCTTGTCC 27043 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||| || |||||||| || | ||||| || | ||||| ||| Sbjct 27042 TGGATCTTCGACTTGACGTTGTCGATGGTATCGCTAGACTCCACCTCGAGGGTGATGGTC 26983 Query 225682 TTGCCCGT 225689 ||||| || Sbjct 26982 TTGCCAGT 26975 >seq44 Length=145030 Score = 122 bits (134), Expect = 2e-22 Identities = 160/222 (72%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||| || | ||| || |||||||| ||| || || |||| ||||| |||| || || Sbjct 42078 ACGCAGACGCAGCACGAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGACAGGGT 42019 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 || || || || |||||||| || || ||||| | || || ||||| || || ||||| Sbjct 42018 CCTGCCGTCCTCAAGCTGCTTGCCGGCAAAGATCAAGCGCTGCTGGTCCGGGGGGATACC 41959 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 |||||||| |||||||| ||| ||| ||||||||||| | ||||| || | Sbjct 41958 CTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGCTCGACTCCACCTCAAG 41899 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| ||||||||||| | || || | ||| | ||||| Sbjct 41898 GGTGATAGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 41857 >seq20 Length=34843 Score = 114 bits (126), Expect = 3e-20 Identities = 194/276 (70%), Gaps = 9/276 (3%) Strand=Plus/Minus Query 7446 ATATTTAATATTTGGTGGCTTTTCTGGTATTAT-AGGTACTATATTTTCTATGATTATAA 7504 |||||||||||||| | ||||| || ||||| ||||||| ||||| | | |||| Sbjct 22502 ATATTTAATATTTGCTCTATTTTCCGG-ATTATTAGGTACTGCGTTTTCAGTACTGATAA 22444 Query 7505 GGTTAGAATTAGCTGCTCC--GGGTTCTCAAATATTGAGTGGTAATAGCCAACTTTACAA 7562 | | || || || || |||| | ||||| || || ||| ||| | || || Sbjct 22443 GAATGGAGCTAAGTGGACCAGGGGTAC---AATATATAGCGG--ATAATCAATTATATAA 22389 Query 7563 CGTTATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTATGCCGGTTATGAT 7622 ||| || || || || || | | |||||||| || | |||||||| | | | || Sbjct 22388 TAGTATAATAACAGCTCACGCTATATTAATGATTTTTTTCATGGTTATGCCAGCTTTAAT 22329 Query 7623 AGGCGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGATATGGCTTTTCC 7682 ||| ||||| || |||| || | ||||||||||| || | ||||||||||| || || Sbjct 22328 AGGTGGTTTTGGTAATTTCTTAATGCCTTTAATGATAGGAGGGCCTGATATGGCATTCCC 22269 Query 7683 AAGGCTTAACAATATAAGTTTTTGATTACTACCGCC 7718 || || || ||||| |||||||||||| |||| || Sbjct 22268 TAGACTAAATAATATTAGTTTTTGATTATTACCACC 22233 >seq758 Length=1180 Score = 109 bits (120), Expect = 1e-18 Identities = 193/276 (70%), Gaps = 9/276 (3%) Strand=Plus/Minus Query 7446 ATATTTAATATTTGGTGGCTTTTCTGGTATTAT-AGGTACTATATTTTCTATGATTATAA 7504 |||||||||||||| | ||||| || ||||| ||||||| ||||| | | |||| Sbjct 1137 ATATTTAATATTTGCTCTATTTTCCGG-ATTATTAGGTACTGCGTTTTCAGTACTGATAA 1079 Query 7505 GGTTAGAATTAGCTGCTCC--GGGTTCTCAAATATTGAGTGGTAATAGCCAACTTTACAA 7562 | | || || || || |||| | ||||| || || ||| ||| | || || Sbjct 1078 GAATGGAGCTAAGTGGACCAGGGGTAC---AATATATAGCGG--ATAATCAATTATATAA 1024 Query 7563 CGTTATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTATGCCGGTTATGAT 7622 ||| || || || || || | | |||||||| || | |||||||| | | | || Sbjct 1023 TAGTATAATAACAGCTCACGCTATATTAATGATTTTTTTCATGGTTATGCCAGCTTTAAT 964 Query 7623 AGGCGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGATATGGCTTTTCC 7682 ||| ||||| || |||| || | ||||||||||| || | ||||||||||| || | Sbjct 963 AGGTGGTTTTGGTAATTTCTTAATGCCTTTAATGATAGGAGGGCCTGATATGGCATTCAC 904 Query 7683 AAGGCTTAACAATATAAGTTTTTGATTACTACCGCC 7718 || || || ||||| |||||||||||| |||| || Sbjct 903 TAGACTAAATAATATTAGTTTTTGATTATTACCACC 868 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192517448624600