Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F002218435.1_202017-07-14] 1,386 sequences; 42,670,599 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq988 138 2e-27 seq798 127 3e-24 seq33 84.2 3e-11 >seq988 Length=39332 Score = 138 bits (152), Expect = 2e-27 Identities = 338/511 (66%), Gaps = 10/511 (2%) Strand=Plus/Plus Query 96876 CAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGGCACGCGGAC 96935 ||||| ||||| || || || || || | ||| ||||| | || || |||||||| || Sbjct 30840 CAGGGTGGCAACAAGCGCCCCGGTGCCTTTGCCATCTACCTTGAGCCGTGGCACGCAGAT 30899 Query 96936 GTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGAGCCAGGGAC 96995 || || || || |||| | | || ||| || || ||| || ||| | ||| Sbjct 30900 GTCTTCGAGTTCCTCGACCTAAGGAAGAACCACGGAAAGGAGGAGATTCGTGCCCGTGAC 30959 Query 96996 TTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAACGACGGTGGCTAC 97055 |||| || || ||| | || ||| |||||||||||||||| | | ||| || Sbjct 30960 CTGTTCCTCGCTCTTTGGATCCCTGATCTGTTCATGAAGCGCGTTGAGAAAAACGGCGAC 31019 Query 97056 TGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGGGGCGAAGAGTTT 97115 |||| | | |||||||| || || || || || | || |||| || |||||||| Sbjct 31020 TGGACCTTGATGTGCCCGAACGAGTGCCCTGGCCTCGCGGACTGCTACGGTGAAGAGTTC 31079 Query 97116 GAGGCCAAGTACACGGCCTACGAGCAAGAGGGCCGATA-----CGTGAGACGAGTCGATG 97170 ||||| ||| | || ||||| ||||| || || |||||| || | | Sbjct 31080 GAGGCTCTGTATGAGAAGTATGAGCA----GGCCGGTAAGGGTCGCAAGACGA-TCAAGG 31134 Query 97171 CACGAGAACTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCCGTACATTC 97230 | | |||| ||| | ||||| || ||||||| |||||||| | |||| ||| | Sbjct 31135 CCCAGAAACTTTGGTACTCCATCCTGGAGGCTCAGACTGAGACTGGTAACCCGTTCATGC 31194 Query 97231 TCTACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCACCATCAAGGGCT 97290 | ||||||||| | || ||||| |||||||| || | || ||||| ||| Sbjct 31195 TGTACAAGGATCACTGCAACCGCAAGAGCAACCAGAAGAACCTTGGTACCATTCGCAGCT 31254 Query 97291 CCAATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAGACGGCAGTTTGCGTTC 97350 |||| || |||||||| ||| | |||||| | | || |||||| || || ||| | Sbjct 31255 CCAACCTCTGCACGGAGATTATCGAGTACTCTGCCCCTGACGAGGTTGCTGTATGCAACC 31314 Query 97351 TGGCATCGGTCAATCTGCCCAAGTTTGTAGA 97381 | || || | ||||||| |||| || || Sbjct 31315 TTGCTTCCCTGGCTCTGCCCCAGTTCGTCGA 31345 >seq798 Length=38732 Score = 127 bits (140), Expect = 3e-24 Identities = 203/286 (71%), Gaps = 4/286 (1%) Strand=Plus/Minus Query 125022 TGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTGTCC 125081 ||| | |||||||| ||||| ||||||| || ||||||| ||||||| | ||| ||||| Sbjct 2146 TGGCAGATGTACAAGAAGGCCGAGGCCTCATTCTGGACGGCCGAAGAGATTGATTTGTCC 2087 Query 125082 AAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCGCAC 125141 ||||| || |||| ||| | | | || || ||| | || || || ||| Sbjct 2086 AAGGATCTCCACGACTGGAACAACAAGCTCACAGATGATGAAAAGTACTTCATCTCACAC 2027 Query 125142 ATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCT-GTTGACACGATT 125200 || | || ||||| |||| || ||||| ||||||||||| || || ||||| ||||| Sbjct 2026 ATCCTTGCATTCTTCGCCGCTTCTGATGGCATCGTCAACGAGAACCTCGTTGA-GCGATT 1968 Query 125201 C-TCTCAAGAGTTGACCATTCCAGAGGTGTCGTGCTTTTACGGATTCCAAATCATGATTG 125259 | | | ||| | ||||| |||| ||||| ||||| ||||| |||||||| | Sbjct 1967 CAGCGCCGAAGTCCA-GATTCCCGAGGCCCGTTGCTTCTACGGCTTCCAGATCATGATGG 1909 Query 125260 AGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACAT 125305 ||||| | ||||| || | ||||| ||||| |||| |||||| Sbjct 1908 AGAACATTCACTCCGAGACTTACTCGCTCCTGATCGACACGTACAT 1863 Score = 122 bits (134), Expect = 1e-22 Identities = 346/529 (65%), Gaps = 17/529 (3%) Strand=Plus/Minus Query 125361 ATACGTAAAAAGGCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCC 125420 || || || ||||| | |||| | |||||||| ||| | ||||| | | ||| Sbjct 1739 ATCCGCAAGAAGGCCGACTGGGCTCTGAGGTGGATCACCGACAAGAAGTCAACCTTTGCC 1680 Query 125421 GACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCC 125480 | ||| | || ||||| | ||| ||||| |||||||| ||| |||||| || Sbjct 1679 ACGCGCCTGATCGCTTTCGCTGTCGTCGAGGGTATCTTCTTCAGCGGTGCTTTTGCCTCC 1620 Query 125481 ATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATA 125540 ||||| |||||||||||||| || || ||||| || ||||| | |||||| | || Sbjct 1619 ATCTTCTGGCTCAAGAAGCGTGGCCTGATGCCTGGTCTGACTTTCTCCAACGAGCTCATC 1560 Query 125541 TCTCGAGACGAGGGCCTACACTGTGACTTTGCCATTCTACTGTT-TCGCAACTATCTGCG 125599 || || || ||||| |||||| ||||||||| ||| ||||| |||| Sbjct 1559 TCGCGTGATGAGGGTCTACACACCGACTTTGCCTGTCTCCTGTTCTCGC----------- 1511 Query 125600 TCCCG-AGTGCAGATCCAGCGATGAAAAGGTCATCAACATTGTAACCGATGCCGTGAGGA 125658 ||| | | ||| ||| | | || || | | ||||| |||||| || | || Sbjct 1510 TCCTGAACAACAGGCCCAACAAGGAGGTTGTGAAGGAGATTGTTGTCGATGCTGTCAAGA 1451 Query 125659 TAGAACAAGAGTTTCTAACCGAATCCCTACCGGTCAGCATGATTGGCATGAACTGCAAGC 125718 | || ||||||||||| || || | | || | | | | ||||||||| ||| | Sbjct 1450 TTGAGCAAGAGTTTCTTACGGAGGCGTTGCCCTGCGCCCTCCTGGGCATGAACGCCAACC 1391 Query 125719 TAATGTGCGAGTACATAGAGTTTGTGGCAGATCGTCTACTGTACGAGTTGATTGGCCGCA 125778 | ||| ||||||| |||||||| || || | || || || | | | Sbjct 1390 TGATGAAGCAGTACATTGAGTTTGTCGCTGACAGACTTCTTGTCGCCCTCGGAAACGAGA 1331 Query 125779 AGATTTACAACGCCAAGAATCCCTTTGATTTCATGACCAGCATATCACTAGAGGGTAAGA 125838 || | ||| |||| || || || ||||| ||| | ||| ||||| | || |||| Sbjct 1330 AGGTCTACCGTGCCACCAACCCATTCGATTTTATGGAGAACATCTCACTCGGCGGCAAGA 1271 Query 125839 CCAACTTTTTCGAGAAGAAGGTCAGCGAGTAC--AAACGCTACGGTGTC 125885 ||||||| |||||||| || |||||||| ||| || ||||||| Sbjct 1270 CCAACTTCTTCGAGAAACGCGTTGGCGAGTACCAAAAAGC--CGGTGTC 1224 >seq33 Length=245588 Score = 84.2 bits (92), Expect = 3e-11 Identities = 136/193 (70%), Gaps = 6/193 (3%) Strand=Plus/Plus Query 70333 CGACATGGGCCTCGGTGTACCCTTTAACATTGCAAGCTATTCTATGTTGACGCACATGAT 70392 |||||||||||| || || ||||| |||||||| ||||| | || ||||||||||||| Sbjct 38102 CGACATGGGCCTAGGCGTGCCCTTCAACATTGCCAGCTACGCACTGCTGACGCACATGAT 38161 Query 70393 TGCTCACATTACCGGCCTGAAAGCGCACGAGT-TCGTACACAC--CATTGGCGACGCTCA 70449 ||| | || || || || || || || | || ||| ||| ||||| ||||| Sbjct 38162 TGCGCGTGCCACGGGTCT---AGTGCCCGGGTCGCTGACGCACGTCATGGGCGATGCTCA 38218 Query 70450 CGTGTATTTAAATCACATCGAGCCATTAAAGGTGCAACTCGAACGGGAGCCGAGACCTTT 70509 ||| || | ||| |||| || | | |||| || || || |||||||| || || Sbjct 38219 CGTCTACGCCGACCACGTCGACGCACTCCGGATGCAGCTGGAGCGCGAGCCGAGGCCGTT 38278 Query 70510 TCCCAAGCTGGAG 70522 ||| |||| ||| Sbjct 38279 CCCCGAGCTCGAG 38291 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741046361149360