Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F002218435.1_202017-07-14] 1,386 sequences; 42,670,599 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq68 156 5e-33 seq356 123 3e-23 seq254 98.7 1e-15 >seq68 Length=136476 Score = 156 bits (172), Expect = 5e-33 Identities = 164/216 (76%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437 ||||| ||| || || | || |||||||| ||||| ||||||||||| || || | | Sbjct 95455 ACGCAGCACGAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGACAGGGTCCTGCC 95514 Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTT 46497 ||| || |||||||||||||| || ||||||||||||||||| | || | | |||||| Sbjct 95515 GTCCTCAAGCTGCTTGCCGGCAAAGATCAAGCGCTGCTGGTCCGGGGGGATACCCTCCTT 95574 Query 46498 GTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGAT 46557 |||| |||||| ||||| | | | ||||||||||| ||||| || | ||||| Sbjct 95575 GTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGCTCGACTCCACCTCAAGGGTGAT 95634 Query 46558 GGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || |||||||| || || || || ||||| ||||| Sbjct 95635 AGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 95670 >seq356 Length=53279 Score = 123 bits (136), Expect = 3e-23 Identities = 141/187 (75%), Gaps = 2/187 (1%) Strand=Plus/Minus Query 46384 CACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTC 46443 ||| || || | ||||||||||| ||||| ||||||||||| || || || |||| || Sbjct 21655 CACGAGGTGGAGAGTACTCTCCTTCTGGATGTTGTAGTCGGAAAGTGTCCGACCGTCCTC 21596 Query 46444 GAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 46503 ||| ||||||||||| || || | ||||| ||||| | || | | |||||||||| Sbjct 21595 GAGTTGCTTGCCGGCAAAAATAAGACGCTGTTGGTCCGGAGGGATACCCTCCTTGTCCTG 21536 Query 46504 GATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTT 46562 ||||||| ||||| ||| | | | || ||||| || ||||| || | |||||||| | Sbjct 21535 GATCTTCGACTTGA-CGTTGTCGATGGTATCGCTAGACTCCACCTCGAGGGTGATGGTCT 21477 Query 46563 TGCCCGT 46569 |||| || Sbjct 21476 TGCCAGT 21470 Score = 114 bits (126), Expect = 1e-20 Identities = 155/216 (72%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437 ||||| |||| |||| ||| ||||||||||| ||||||||||| || ||||| | Sbjct 22117 ACGCAGGACCAAGTGCAGAGTAGATTCCTTTTGGATGTTGTAGTCGGACAGCGTGCGTCC 22058 Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTT 46497 || || | |||||| || ||||| |||| ||||| ||||| | || | | |||||| Sbjct 22057 ATCCTCCAACTGCTTTCCAGCGAAGATCAGTCGCTGTTGGTCCGGAGGAATACCCTCCTT 21998 Query 46498 GTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGAT 46557 ||| |||||| || | | | | |||||| || || || |||| |||||| Sbjct 21997 GTCTTGGATCTTGGATTTAACATTGTCAATCGTGTCTGAAGACTCGACCTCCAACGTGAT 21938 Query 46558 GGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 ||| |||||||||| || || || ||||| ||||| Sbjct 21937 GGTCTTGCCCGTCAAAGTCTTGACGAAGATCTGCAT 21902 Score = 111 bits (122), Expect = 2e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444 |||| ||| | || |||||||||||||| ||||||||||| || || || |||| || Sbjct 21882 ACCAAATGGAGGGTGCTCTCCTTTTGGATGTTGTAGTCGGAAAGGGTCCGACCGTCCTCA 21823 Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504 |||||||| || ||||| || | ||| || ||||| | || | | |||||||||| | Sbjct 21822 AGCTGCTTTCCAGCGAAAATAAGGCGTTGTTGGTCCGGAGGAATACCCTCCTTGTCCTGG 21763 Query 46505 ATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTG 46564 |||||| ||| | | | | || ||| || || || |||| || || || ||| Sbjct 21762 ATCTTCGACTTTACATTGTCGATGGTATCGGAGGACTCGACCTCCAAGGTAATCGTCTTG 21703 Query 46565 CCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || || || ||||| || || || ||||| Sbjct 21702 CCAGTGAGGGTTTTGACGAAAATCTGCAT 21674 Score = 109 bits (120), Expect = 6e-19 Identities = 156/217 (72%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437 ||| | ||| || |||| || |||||| || |||||||| || || || || || | Sbjct 22345 ACGGAGCACAAGGTGCAGAGTCGACTCCTTCTGAATATTGTAATCAGACAGGGTTCGTCC 22286 Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTT 46497 || || ||||||||||| || || ||||| || || ||||| | ||| | | |||||| Sbjct 22285 ATCCTCCAGCTGCTTGCCCGCAAAGATCAAACGTTGTTGGTCAGGCGGGATACCCTCCTT 22226 Query 46498 GTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCCACCGTGA 46556 ||| ||||| |||| ||| | | | ||||| ||||| || || | |||| Sbjct 22225 GTCTTGAATCTTTGATTTGA-CGTTGTCGATTGTGTCTGAAGATTCAACTTCGAGTGTGA 22167 Query 46557 TGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 |||||||||| || ||||| || || ||||||||||| Sbjct 22166 TGGTTTTGCCGGTAAGCGTCTTGACGAAGATTTGCAT 22130 >seq254 Length=61526 Score = 98.7 bits (108), Expect = 1e-15 Identities = 131/182 (72%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 46404 CCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 46463 |||| ||||| ||||||||||| ||||| || |||| || ||||||||||| || || | Sbjct 43112 CCTTCTGGATGTTGTAGTCGGAGAGAGTACGGCCGTCCTCCAGCTGCTTGCCAGCAAAGA 43053 Query 46464 TCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG 46523 | | ||||| ||||| | || | | |||||||||| ||||| ||| | | Sbjct 43052 TAAGACGCTGTTGGTCAGGGGGAATTCCCTCCTTGTCCTGAATCTTGGACTTCACATTGT 42993 Query 46524 CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAA 46583 | | |||||| || || || |||| |||||||| ||||| ||||| || || || | Sbjct 42992 CGATCGTGTCCGAGGACTCGACCTCCAAGGTGATGGTCTTGCCAGTCAGAGTCTTCACGA 42933 Query 46584 AG 46585 || Sbjct 42932 AG 42931 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565228607244720