Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F002218435.1_202017-07-14] 1,386 sequences; 42,670,599 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq798 138 2e-26 seq988 104 4e-16 seq1065 89.7 8e-12 seq267 89.7 8e-12 seq524 86.0 1e-10 >seq798 Length=38732 Score = 138 bits (152), Expect = 2e-26 Identities = 166/226 (73%), Gaps = 0/226 (0%) Strand=Plus/Plus Query 793908 TACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCATC 793967 |||||||| ||||| |||||| |||||||||||||| |||| ||||| |||||| Sbjct 1240 TACTCGCCAACGCGTTTCTCGAAGAAGTTGGTCTTGCCGCCGAGTGAGATGTTCTCCATA 1299 Query 793968 CACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGAGCGACGCAAGCAGGCGG 794027 | ||| ||||||| | ||||| ||||||| ||||| | |||| || | | Sbjct 1300 AAATCGAATGGGTTGGTGGCACGGTAGACCTTCTCGTTTCCGAGGGCGACAAGAAGTCTG 1359 Query 794028 TCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCATGCCGATGAGCGCCACG 794087 || ||||| || ||||||||||| ||| ||| |||||||||||| | ||| || | Sbjct 1360 TCAGCGACAAACTCAATGTACTGCTTCATCAGGTTGGCGTTCATGCCCAGGAGGGCGCAG 1419 Query 794088 GGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGCCTCGA 794133 |||| || ||| | | |||||||| ||| |||| ||| || |||| Sbjct 1420 GGCAACGCCTCCGTAAGAAACTCTTGCTCAATCTTGACAGCATCGA 1465 Score = 86.0 bits (94), Expect = 1e-10 Identities = 67/80 (84%), Gaps = 0/80 (0%) Strand=Plus/Plus Query 794587 TCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTTTTCGATGGCG 794646 ||||||| ||| |||||||| ||||||||||| ||||| ||||| ||||| || || | Sbjct 1857 TCCTTGATGTACGTGTCGATCAGGAGCGAGTAAGTCTCGGAGTGAATGTTCTCCATCATG 1916 Query 794647 ATCTGGAAGCCATAAAAGCA 794666 ||||||||||| || ||||| Sbjct 1917 ATCTGGAAGCCGTAGAAGCA 1936 >seq988 Length=39332 Score = 104 bits (114), Expect = 4e-16 Identities = 150/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 2071801 AGGCCGGGCGCCTCGGACGGGCAAAAGAGCGACCAGTCGCCGCCAGTCACCACGCGGCGC 2071860 ||||| || |||| |||||| | | | |||||||||| || | ||||| | Sbjct 31054 AGGCCAGGGCACTCGTTCGGGCACATCAAGGTCCAGTCGCCGTTTTTCTCAACGCGCTTC 30995 Query 2071861 ATAAACAGGTCGCACGTCCACAGGCCGTAAAAGAGATCGCGCGCCCGGTTCTCCTCCTTG 2071920 || ||||| || |||| || || || || || || || || |||||||||| Sbjct 30994 ATGAACAGATCAGGGATCCAAAGAGCGAGGAACAGGTCACGGGCACGAATCTCCTCCTTT 30935 Query 2071921 CCGTGGTTCTTTTTCAGGTCGAGCCAGTCGACGAGGTCGGCGTGCCACGGCTCCAGGTAG 2071980 ||||||||||| | |||||||| | |||| || || |||||||||||||| |||||| Sbjct 30934 CCGTGGTTCTTCCTTAGGTCGAGGAACTCGAAGACATCTGCGTGCCACGGCTCAAGGTAG 30875 Query 2071981 CAGGCAAAGGCGCCCTTGCGCTTGCCGCCGCC 2072012 ||||||||| || ||||||| ||| || Sbjct 30874 ATGGCAAAGGCACCGGGGCGCTTGTTGCCACC 30843 >seq1065 Length=27288 Score = 89.7 bits (98), Expect = 8e-12 Identities = 78/97 (80%), Gaps = 0/97 (0%) Strand=Plus/Minus Query 2175076 TGCCGTCGGTGCCGTTTTTAAACCCGACCGGCAACGGCAGCGCCGACGCCATTTCGCGGT 2175135 |||||||||||||||| || || ||||| || |||| || | || |||| ||||||| Sbjct 11997 TGCCGTCGGTGCCGTTCTTGAAGCCGACGGGGAACGATAGGCCAGAGGCCAGCTCGCGGT 11938 Query 2175136 GCACCTGGCTCTCGGTGGTGCGCGCGCCCACGGCGCC 2175172 | | |||||||||||||||||| || || || ||||| Sbjct 11937 GAAGCTGGCTCTCGGTGGTGCGGGCACCGACTGCGCC 11901 >seq267 Length=97218 Score = 89.7 bits (98), Expect = 8e-12 Identities = 94/121 (78%), Gaps = 2/121 (2%) Strand=Plus/Minus Query 2233091 GTCGCCTTTCCCACCGAGACCGTCTATGGCCTCGGCGCCGACGCGGCGT-CAGACGAGGC 2233149 |||| ||| || |||||||| || ||||| ||||| || ||||| | ||| || || Sbjct 66740 GTCGGCTTCCCAACCGAGACGGTTTATGGTCTCGGAGCAGACGCCACACGCAG-CGCTGC 66682 Query 2233150 CGTACAGCGCATCTTTGACGCCAAGGGCCGACCGTCCAACAACCCGATCATCGTGCACGT 2233209 ||| | |||||| || |||||||| || |||||| |||||||| ||||||||||||| Sbjct 66681 CGTCAGGGGCATCTATGCTGCCAAGGGTCGGCCGTCCGACAACCCGCTCATCGTGCACGT 66622 Query 2233210 G 2233210 | Sbjct 66621 G 66621 >seq524 Length=98225 Score = 86.0 bits (94), Expect = 1e-10 Identities = 73/90 (81%), Gaps = 0/90 (0%) Strand=Plus/Plus Query 1485471 GTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCAT 1485530 ||||||||| || |||||||||||||| || ||||||||| |||| || || ||| ||| Sbjct 36550 GTACTTGGTAACAGCCTTGGTACCCTCAGACACGGCGTGCTTGGCAAGCTCACCGGGCAA 36609 Query 1485531 GATCAGGCGCACGGCGGTCTGGATCTCGCG 1485560 ||| || | || | |||||||||||| || Sbjct 36610 GATAAGCCTGACCGAGGTCTGGATCTCACG 36639 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916098964858454