Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F002218465.1_202017-07-14] 1,332 sequences; 41,771,944 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq1227 138 1e-27 seq1272 118 1e-21 seq1287 116 4e-21 seq326 111 2e-19 >seq1227 Length=54087 Score = 138 bits (152), Expect = 1e-27 Identities = 169/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || | |||||||| |||||||| | || |||||| | | Sbjct 22954 ATGCAGATCTTCGTCAAGACTTTGACGGGCAAGACCATCACGTTGGAGGTCGAGTCTTCA 23013 Query 38304 GACA-GCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | || || | ||||| || |||| ||||| ||||| ||||| | ||||| Sbjct 23014 GACACGATTGACAATG-TTAAATCCAAGATCCAAGACAAGGAGGGTATTCCTCCGGACCA 23072 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 |||||| || || | ||| || || ||| |||| || | ||||| || ||||||||| Sbjct 23073 ACAGCGACTGATCTTCGCTGGAAAGCAGTTGGAGGATGGACGCACGCTGTCCGACTACAA 23132 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||||||||||| | || ||||| ||||| |||||| || | || || Sbjct 23133 CATCCAAAAGGAATCTACTCTGCACTTGGTCCTGCGTCTGCGTGGTGG 23180 Score = 134 bits (148), Expect = 1e-26 Identities = 165/219 (75%), Gaps = 6/219 (3%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| ||||| ||||| ||||| || || ||| | || |||||| || || Sbjct 22726 ATGCAGATTTTCGTCAAAACCCTCACTGGCAAGACGATTACCTTGGAGGTCGAGTCCTCC 22785 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361 || | | | | || | ||||| || |||| ||||| ||||| ||||| | |||| Sbjct 22786 GATACCATCGACAATG--TAAAGTCGAAGATCCAGGACAAGGAGGGTATTCCTCCGGACC 22843 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 |||| || || |||| ||| || || ||||| || |||| || ||||| |||||||| Sbjct 22844 AACAACGCCTTATTTTCGCTGGAAAGCAGCTTGAGGACGGTCGGACCCTTTCCGACTACA 22903 Query 38422 ACATCCAAAAGGA-AGCGACGCTGCATTTGGTGCTGCGT 38459 ||||||||||||| ||| || || |||||||| || ||| Sbjct 22904 ACATCCAAAAGGAGAGC-ACCCTCCATTTGGTCCTTCGT 22941 Score = 111 bits (122), Expect = 2e-19 Identities = 165/229 (72%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| || ||||| || |||||||||||||| |||| || || | | Sbjct 23182 ATGCAAATCTTCGTCAAGACGCTTACCGGCAAAACCATCACACTCGAAGTTGAATCTTCA 23241 Query 38304 GACAGCGT-GCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCC-GACC 38361 |||| | | |||| | ||| ||| || | ||||| ||||| | ||||||| |||| Sbjct 23242 GACACAATCGACAACG-TCAAATCAAAGATTCAAGACAAGGAGGGTA-TCCCGCCTGACC 23299 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 |||| || | || | |||||||| |||||||| || | || ||||| || |||| Sbjct 23300 AACAACGTTTGATCTTTGCGGGCAAGCAGCTGGAGGATGGACGAACCCTGTCTGATTACA 23359 Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 | || || ||||| |||| ||||| | ||||| ||| | | ||||| Sbjct 23360 ATATTCAGAAGGAGTCGACTCTGCACCTTGTGCTCCGTCTTCGTGGCGG 23408 Score = 93.3 bits (102), Expect = 4e-14 Identities = 124/170 (73%), Gaps = 2/170 (1%) Strand=Plus/Plus Query 38266 TCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGCA-AACGCTTAAA 38324 |||| ||||| ||||||||| |||| || ||| | | ||| | | | | |||| | || Sbjct 22520 TCACTGGCAAGACCATCACCCTCGAGGTGGAGTCTAGCGATACCATCGACAACG-TCAAG 22578 Query 38325 GAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGC 38384 || |||| ||||| ||||| || || | ||||||||||| || |||| || ||| Sbjct 22579 TCGAAGATCCAGGACAAGGAGGGTATCCCTCCGGACCAACAGCGTCTTATTTTTGCCGGC 22638 Query 38385 AAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGA 38434 || || || || |||| || || || ||||||||||||||| ||||| Sbjct 22639 AAGCAACTCGAGGACGGTCGGACACTTTCCGACTACAACATCCAGAAGGA 22688 >seq1272 Length=8301 Score = 118 bits (130), Expect = 1e-21 Identities = 199/285 (70%), Gaps = 5/285 (2%) Strand=Plus/Minus Query 133167 GTAGGTGTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAA 133226 ||| |||||||| ||| ||| || | || ||||| | ||||||||| ||| || || Sbjct 6893 GTACGTGTCGATCAGGAGCGAGTAAGTCTCGGAGTGAATGTTCTCCATCATGATCTGGAA 6834 Query 133227 GCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGC-GAAACGCTCGACCAGAT 133285 |||||| ||||| || |||||| | ||| ||||| | || ||| ||||| || || | Sbjct 6833 GCCGTAGAAGCAACGGGCCTCGGGAATCTGGACTTCG-GCGCTGAATCGCTCAACGAGGT 6775 Query 133286 TTTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGC 133345 | |||||||||||||| || |||||||| || || || | ||| |||||| | Sbjct 6774 TCTCGTTGACGATGCCATCAGAAGCGGCGAAGAATGCAAGGATGTGTGAGATGAAGTACT 6715 Query 133346 GCTCGTTGTC---GTTCAAGCGCTCCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCT 133402 || | || | | | | ||||||| | |||||||||| || | ||| | Sbjct 6714 TTTCATCATCTGTGAGCTTGTTGTTCCAGTCGTGGAGATCCTTGGACAAATCAATCTCTT 6655 Query 133403 CGACGGTCCAAAACGACGCCTCGGCTTTTTTGTACATACTCCACA 133447 || | ||||| || || |||||||| || |||||||| ||||| Sbjct 6654 CGGCCGTCCAGAATGAGGCCTCGGCCTTCTTGTACATCTGCCACA 6610 >seq1287 Length=163115 Score = 116 bits (128), Expect = 4e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || ||||||||||| || |||||| | || || ||| | | | Sbjct 122787 ATGCAGATCTTCGTCAAGACCCTCACGGGCAAGACTATCACCCTTGAGGTGGAGTCGAGC 122728 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | | || || |||| ||||| ||||| || ||| | ||||| Sbjct 122727 GACACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCAG 122668 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| | || | || ||||| ||||| || |||| | |||||| |||||||||| Sbjct 122667 CAGCGCTTGATCTTTGCCGGCAAGCAGCTTGAGGACGGCAGGACCCTCTCCGACTACAAC 122608 Query 38424 ATCCAAAAGGA-AGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||| ||||| ||| || || || | ||||||||| || | || || Sbjct 122607 ATCCAGAAGGAGAGC-ACCCTCCACCTCGTGCTGCGTCTGCGTGGTGG 122561 >seq326 Length=132526 Score = 111 bits (122), Expect = 2e-19 Identities = 133/181 (73%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 38253 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTG 38312 ||||| || || || || ||||| ||||||||| | || |||||| || | |||| | Sbjct 18646 TTCGTGAAGACTCTGACTGGCAAGACCATCACCTTGGAGGTCGAGTCCTCGGACACGATC 18587 Query 38313 CAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTC 38372 | | | || || || | ||||| |||||||||||| | ||||||||||| || Sbjct 18586 GACAATGTGAAGTCCAAGATTCAGGACAAGGAGGGAATTCCCCCTGACCAACAGCGTCTT 18527 Query 38373 ATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAG 38432 || | || ||||| |||||||| |||| || || ||| ||||||||||||||| ||| Sbjct 18526 ATCTTTGCTGGCAAGCAGCTGGAGGACGGCCGTACTCTCTCCGACTACAACATCCAGAAG 18467 Query 38433 G 38433 | Sbjct 18466 G 18466 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500164472122880