Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F002218465.1_202017-07-14] 1,332 sequences; 41,771,944 total letters Query= NC_017940.1 Length=127732 Score E Sequences producing significant alignments: (Bits) Value seq484 109 4e-19 >seq484 Length=39283 Score = 109 bits (120), Expect = 4e-19 Identities = 267/400 (67%), Gaps = 10/400 (3%) Strand=Plus/Plus Query 29989 ACGTAAAACTG---ACACATGGTGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTG 30045 ||||||||||| | ||||| |||||||| || || |||| || | ||| ||| Sbjct 1038 ACGTAAAACTGCGCAAACATG---TGGCACGGCGGCAGGACCATAAGCTTGAGGTCCTTG 1094 Query 30046 GGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACG 30105 |||||||| || | | | ||||| | ||| | ||||| | | || || |||| Sbjct 1095 GGGTTCCAAGCACTAAGAACCATGCGGCGGTCGTACGGGTTCGTGCGGAGCTTGTGCACG 1154 Query 30106 GCGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTACTCT 30165 | | ||||| || || ||| |||| ||||||||| ||| ||||| || Sbjct 1155 ACCTCGGCGAGCTGGTCGACGCCCTGGCCCGTGTAGTCTGCGTGGCAGTCGGTGTATTCG 1214 Query 30166 GCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGC 30225 || || || || | ||| ||||| ||||| || || |||||||| ||| | || | |||| Sbjct 1215 GCGCCAAAGTGGCGCCATTGGAAGCCGTAGACGGGGCCCAGGTCGCCCACCTCGCGGTGC 1274 Query 30226 TCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCC- 30284 | || ||| | ||||| || || | | |||||| ||||||||||||| ||||| Sbjct 1275 TGCAATCCCAGCCCGTCCAGGAACTCACGGCTGCCGTTGCCGTCCCAGATCTTGACCCCG 1334 Query 30285 -CTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCA 30343 | || | || | ||| | | || | || ||||||||||||||||| | Sbjct 1335 GCGTCGCTCAG-GGGCTTCGCCG-ACGTCGCGCCCGACACGAACCACAGCAGCTCGAGGA 1392 Query 30344 CGACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGG 30383 |||||| | | ||||| | ||| ||||| || || || Sbjct 1393 TCACGGCCCGCGAGAAGACGCGCTTCGTCGTCAGCAGAGG 1432 Score = 104 bits (114), Expect = 2e-17 Identities = 156/222 (70%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 29748 CCTGTTTATCCTCAGTGTGGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAGTCTTCAGCGG 29807 |||||| ||| || ||| || || || ||||| | ||| ||||| || || | Sbjct 716 CCTGTTGATCTCGAGCTCGGGGAACGGCCTCGGCTCGCGCTCCAGCTGCATCCGGAGTGC 775 Query 29808 TTCCACGTGATCCAGGTAGACGTGAGCGTCTCCCAGGGTGTGGACAAACTCTCCCGGTTC 29867 || ||||| || |||||||||||| || |||| | ||| | | || || | Sbjct 776 GTCGACGTGGTCGGCGTAGACGTGAGCATCGCCCATGACGTGCGTCAGCGACCCGGGCAC 835 Query 29868 TAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGG 29927 ||| || ||| | | || ||||||| ||| || || | ||||||||| ||||| ||||| Sbjct 836 TAGACCCGTGGCACGCGCAATCATGTGCGTCAGCAGTGCGTAGCTGGCAATGTTGAAGGG 895 Query 29928 TACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACA 29969 || || || |||||||| | |||| |||||||||||| || Sbjct 896 CACGCCTAGGCCCATGTCGCAGGACCGCTGGTAGAGCTGGCA 937 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408610966604036