Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F002218465.1_202017-07-14] 1,332 sequences; 41,771,944 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq914 145 9e-29 seq1272 138 1e-26 seq316 105 8e-17 seq735 98.7 1e-14 seq370 98.7 1e-14 seq272 96.9 4e-14 seq1210 95.1 1e-13 >seq914 Length=63143 Score = 145 bits (160), Expect = 9e-29 Identities = 187/258 (72%), Gaps = 0/258 (0%) Strand=Plus/Minus Query 1630065 CTGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGA 1630124 ||||||||||||||| || |||| ||| || || || |||||||| || | |||||| || Sbjct 31066 CTGGTCGACGTAGCGAGCTGTGTTGTTGAACACACGCAGCATGGGAACAATGCCGTTCGA 31007 Query 1630125 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAAGCC 1630184 ||||||||| || || | |||| ||| | ||| || | || || | || Sbjct 31006 GGTGCCGTTGGTACCGGCGATATAGGAGCCAGTGGCACGGATGCGATGGACGTTGAGACC 30947 Query 1630185 GATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCCCTC 1630244 ||| ||||| ||| ||||||||| | || || ||||| ||||||||||| ||||| Sbjct 30946 GATACCGCCAGCCATCTTGGAGATCATGGCACAAGTCTTGAGGGTGTCGTAGATTCCCTC 30887 Query 1630245 GATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTGCC 1630304 || |||| ||||||| || || || ||||| ||||| || | |||| ||||| Sbjct 30886 AATGCTGTCGTCCTTCATATCAACCAGGAAGCATGACGACAACTGAGCCTGCGGTGTGCC 30827 Query 1630305 GGCGTTGAAGAGCGTGGG 1630322 ||||||||| ||||| || Sbjct 30826 GGCGTTGAAAAGCGTCGG 30809 Score = 98.7 bits (108), Expect = 1e-14 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 1628374 CCGTAGCACTCGTGCAGGCCGGGCGCCTCGGACGGACAAAAGAGCGACCAGTCGCCACCG 1628433 |||||||| || ||||| || |||| ||| || | | | ||||||||| Sbjct 31293 CCGTAGCAGTCCGCGAGGCCAGGGCACTCGTTCGGGCACATCAAGGTCCAGTCGCCGTTT 31234 Query 1628434 GTCACCGCGCGGCGCATAAAGAGGTCACACGTCCACAGTGCGTAAAAGAGGTCGCGCGCC 1628493 || | |||| ||| || || ||| |||| || ||| || ||||| || || Sbjct 31233 TTCTCAACGCGCTTCATGAACAGATCAGGGATCCAAAGAGCGAGGAACAGGTCACGGGCA 31174 Query 1628494 CGGTTCTCCTCCTTGCCGTGGTTCTTTTTGAGGTCGAGCCAGTCGACAATGTCGGCGTGC 1628553 || |||||||||| ||||||||||| | |||||||| | |||| | || |||||| Sbjct 31173 CGAATCTCCTCCTTTCCGTGGTTCTTCCTTAGGTCGAGGAACTCGAAGACATCTGCGTGC 31114 Query 1628554 CACGGCTCCAGGTAGCAGGCAAAGGCGCCCTTGCGCTTGCCGCCGCC 1628600 |||||||| |||||| ||||||||| || ||||||| ||| || Sbjct 31113 CACGGCTCAAGGTAGATGGCAAAGGCACCGGGGCGCTTGTTGCCACC 31067 >seq1272 Length=8301 Score = 138 bits (152), Expect = 1e-26 Identities = 218/311 (70%), Gaps = 1/311 (0%) Strand=Plus/Minus Query 868699 GTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCAT 868758 ||||||||| ||||| |||||| |||||||||||||| |||| ||||| |||||| Sbjct 7519 GTACTCGCCAACGCGTTTCTCGAAGAAGTTGGTCTTGCCGCCGAGTGAGATGTTCTCCAT 7460 Query 868759 CCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCGAGCAGGCG 868818 | ||| ||||||| | |||| ||| ||| |||||| | | || || | Sbjct 7459 AAAATCGAATGGGTTGGTGGCACGGTAGACCTTCTCGTTTCCGAGGGCGACAAGAAGTCT 7400 Query 868819 GTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATGAGCGCCAC 868878 ||| ||||||||||| |||||||| ||| ||| |||||||||||| | ||| || Sbjct 7399 GTCAGCGACAAACTCAATGTACTGCTTCATCAGGTTGGCGTTCATGCCCAGGAGGGCGCA 7340 Query 868879 CGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGATGATCTGCCT 868938 |||| || ||| | | |||||||| ||| |||| ||| || ||||| | |||| | | Sbjct 7339 GGGCAACGCCTCCGTAAGAAACTCTTGCTCAATCTTGACAGCATCGACAACAATCTCCTT 7280 Query 868939 GGGCACGTCGGCCGAGGGCTTGTTGACGAGCATCGTGTAGAGCAGGCAGGCAAAGTCGCA 868998 || || |||| ||||| || | || | | || || |||||||||||| Sbjct 7279 CACAACCTCCTTGTTGGGCCTGTTGTTCAGGAGCGAGAACAGGAGACAGGCAAAGTCGGT 7220 Query 868999 GTGCA-ACCCT 869008 ||| | ||||| Sbjct 7219 GTGTAGACCCT 7209 Score = 95.1 bits (104), Expect = 1e-13 Identities = 117/158 (74%), Gaps = 9/158 (6%) Strand=Plus/Minus Query 869216 AGGCCGGGCATGAGGCCGCGCTTCTTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAA 869275 || || ||||| ||||| |||||||||||||| ||||||| | ||| || ||| Sbjct 7176 AGACCAGGCATCAGGCCACGCTTCTTGAGCCAGAAGATGGAGGCAAAAGCACCGCTGAAG 7117 Query 869276 AAGATGCCCTCGACGGCGGCAAAGCCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCC 869335 ||||| ||||||||| | || || |||| || ||| ||||||| || || || | Sbjct 7116 AAGATACCCTCGACGACAGCGAAAGCGATCAGGCGCGTGGCAAAG--GTTGA----CTTC 7063 Query 869336 TTGT---TGATCCACTTCATCGCCCAGTCGGCCTTTTT 869370 |||| |||||||| ||| |||||||||||||| || Sbjct 7062 TTGTCGGTGATCCACCTCAGAGCCCAGTCGGCCTTCTT 7025 >seq316 Length=61306 Score = 105 bits (116), Expect = 8e-17 Identities = 266/402 (66%), Gaps = 8/402 (2%) Strand=Plus/Minus Query 18088 GTCACCACCTTTGGCGAGTCGCACGGGGCGGGCG-TCGGCTGCATCATCGACGGCGTGCC 18146 || ||||||| ||||||||| ||| | || || | || ||||| |||| || || Sbjct 35077 GTAACCACCTATGGCGAGTCACACTGC-CGCTCGGTGGGATGCATTGTCGATGGATGCCC 35019 Query 18147 GCCGTGCATGCCACTGGCCGAGGCCGACATCCAGCCTCAGTTGGATCGGCGCCGACCGGG 18206 ||| |||||| | || ||||||||||||||||||| || || | || | ||||| || Sbjct 35018 GCCAGGCATGCAATTGACCGAGGCCGACATCCAGCCACACATGAACAGGAGGCGACCTGG 34959 Query 18207 CCAGGGCGCACTTTCCACGCCGCGCAACGAGCCCGATCGCGTCATCATCCAGTCGGGCAC 18266 ||| || | | ||||| ||||| ||| || ||| |||||||||||||| Sbjct 34958 ACAGTCCGATATCACAACGCCCCGCAATGAGGAGGACAAGGTCGAGATCCAGTCGGGCAC 34899 Query 18267 GGAGAACGGCCTCACGCTCGGCTCGCCCGTCGGCCTCTTTGTGGCCAACCGCGACCAGCG 18326 ||| |||| ||||| | ||| | || | ||| | || ||| |||||| | Sbjct 34898 CGAGTTCGGCATCACGTTGGGCACCCCGATTGGCATGCGCGTCATGAACAAGGACCAGAG 34839 Query 18327 GCC------CGTCGACTATTCCGACATGTGCAAGGTGCCGCGGCCCTCACACGCCGACTA 18380 ||| | || | | ||| ||| || | | || || ||| ||||| || | Sbjct 34838 GCCAAAGGACTACGGCAACTCCACTATGGACAGGTTCCCCCGACCCAGCCACGCTGATTG 34779 Query 18381 CACCTACATGGCCAAGTACGGCATCAAGGCGTCGTCGGGCGGAGGCCGGTCGTCTGCCCG 18440 || ||| | | ||||||||| |||||||| ||||| ||| || ||||| Sbjct 34778 GACATACCTCGAGAAGTACGGCGTCAAGGCGAGCAGTGGCGGCGGCAGGAGCAGCGCCCG 34719 Query 18441 CGAGACCCTCATGCGCGTCGCCGCCGGCGCGGTCGCCGAGAA 18482 |||||| | || ||||| ||||| || |||||||||| Sbjct 34718 TGAGACCATTGGCCGAGTCGCAGCCGGTGCCATCGCCGAGAA 34677 Score = 89.7 bits (98), Expect = 6e-12 Identities = 102/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 19047 GACAGCATCGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCGGCAGGCCTCGGCGAG 19106 ||||||||||| || || || || || ||||| | ||| ||||||| |||||| Sbjct 34441 GACAGCATCGGAGGTACTGTTCACTGTGTCATCCGCAATGCGCCATCAGGCCTGGGCGAG 34382 Query 19107 CCGTGCTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATCCCGGCCACC 19166 || ||||| |||||| | |||||| ||| | || || |||||| || || ||||| Sbjct 34381 CCTTGCTTCGACAAGTTGGAGGCCAAGCTGGGGCATGCTATGCTGAGCATTCCTGCCACA 34322 Query 19167 AAGGGATTCGAGATTGG 19183 ||||| ||||||||||| Sbjct 34321 AAGGGTTTCGAGATTGG 34305 >seq735 Length=200407 Score = 98.7 bits (108), Expect = 1e-14 Identities = 84/104 (81%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 1592191 CAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAACATGAT 1592250 ||||||||| || || ||||| || || || |||| ||||| | || || || ||||| Sbjct 54802 CAACTACCTTGATATTAAGCCGCTACTTGACGTTGGTTGCAAAACGGTTGCAAATATGAT 54861 Query 1592251 CAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCA 1592294 |||||||||||| || |||||||| |||||||| || ||||||| Sbjct 54862 CAAGGGCAAGTCCCCAGAGGAGATTCGCAAGACTTTCAACATCA 54905 >seq370 Length=160076 Score = 98.7 bits (108), Expect = 1e-14 Identities = 144/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 1574058 CTGCCGCCCGGACGCCACAAGGTGATCATCCTCGACGAGGCCGACTGCCTCACGTCGGCG 1574117 || ||||| || || || ||| || | || || |||||||||||| || | || || | Sbjct 7558 CTCCCGCCAGGCCGACATAAGCTGGTGATTCTTGACGAGGCCGACAGCATGACATCTGGC 7499 Query 1574118 GCCCAGCAGGCCCTGCGGTCCACCATGGAAAAGCACACCAACACGACGCGCTTTGCCCTG 1574177 || |||||||||||| || || ||||| | || ||||||| ||| | || || | Sbjct 7498 GCACAGCAGGCCCTGAGGCGAACTATGGAGATCTACTCCAACACTACGAGATTCGCTTTC 7439 Query 1574178 GCGTGCAACACGTCGTCGATGGTCATCGAGGCCCTCCAAAGTCGCTGCGCCATTCTGCGC 1574237 ||||||||| ||| | |||| ||| |||| || ||| |||||||| || || Sbjct 7438 GCGTGCAACCAGTCAAACAAAATCATAGAGCCCCTGCAGTCTCGATGCGCCATCCTCCGG 7379 Query 1574238 TTTGTGCGCCTGGGTGACGCCCAG 1574261 | | ||||||| ||||||||| Sbjct 7378 TACGCGCGCCTGACGGACGCCCAG 7355 >seq272 Length=23461 Score = 96.9 bits (106), Expect = 4e-14 Identities = 135/189 (71%), Gaps = 3/189 (2%) Strand=Plus/Plus Query 1726966 GTCGAGGTCGGGGTCGCTGGCCAGGCCCTTCCACCCGACGGTCGTGCGCGGCTTTTCGAC 1727025 ||||| ||||||||| || ||| |||||||| || || || || | |||||||||| Sbjct 10558 GTCGATATCGGGGTCGTTGATCAGACCCTTCCAGCCCACCGTGGTCCTGGGCTTTTCGAG 10617 Query 1727026 ATAGGCGCGCATGACCACGCAAAGCGCGTCGCCGACCTCGTCTCGGACAAAGGCGCGCAG 1727085 ||||||||||| || | ||| || | || || || ||| | | | ||| || Sbjct 10618 GTAGGCGCGCATAACGATGCAGAGGTCATCTGAGAGCTTGTC---GGCCAGGGCCTTGAG 10674 Query 1727086 GCGTCGGCCATAGTCGACGACGGCCGCCGGGTCGTGCGCCGAACACGGACCAACGATAAC 1727145 |||| ||| || |||| | | || ||||||||||| ||| || || ||||||||||| Sbjct 10675 GCGTTGGCAGTATTCGAGGGCCGCTGCCGGGTCGTGAATCGAGCAGGGTCCAACGATAAC 10734 Query 1727146 CAGCAGCCG 1727154 || || || Sbjct 10735 GAGAAGGCG 10743 >seq1210 Length=27308 Score = 95.1 bits (104), Expect = 1e-13 Identities = 101/131 (77%), Gaps = 2/131 (2%) Strand=Plus/Plus Query 1726698 CGGCGCGCACGGCGTCGAGTGCCGTCGCCACGC-TCCCGTCGGTGCCGTTCTTGAAGCCG 1726756 |||||| | ||||||| || || |||| | | |||||||||||||||||||||||| Sbjct 15224 CGGCGCCGATAGCGTCGA-TGGCGACGCCCAGTGTGCCGTCGGTGCCGTTCTTGAAGCCG 15282 Query 1726757 ATGGCCAGCGGCAGTGCCGACGCCATCTCGCGGTGCACCTGGCTCTCGGTCGTGCGCGCG 1726816 | || | || || | || |||| ||||||||| | |||||||||||| ||||| || Sbjct 15283 ACGGGGAACGATAGGCCAGAGGCCAGCTCGCGGTGAAGCTGGCTCTCGGTGGTGCGGGCA 15342 Query 1726817 CCCACGGCGCC 1726827 || || ||||| Sbjct 15343 CCGACTGCGCC 15353 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107029889842244