Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F002218465.1_202017-07-14] 1,332 sequences; 41,771,944 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq1272 138 2e-26 seq914 104 4e-16 seq370 102 1e-15 seq1210 89.7 8e-12 seq248 89.7 8e-12 seq1170 86.0 1e-10 >seq1272 Length=8301 Score = 138 bits (152), Expect = 2e-26 Identities = 166/226 (73%), Gaps = 0/226 (0%) Strand=Plus/Minus Query 793908 TACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCATC 793967 |||||||| ||||| |||||| |||||||||||||| |||| ||||| |||||| Sbjct 7518 TACTCGCCAACGCGTTTCTCGAAGAAGTTGGTCTTGCCGCCGAGTGAGATGTTCTCCATA 7459 Query 793968 CACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGAGCGACGCAAGCAGGCGG 794027 | ||| ||||||| | ||||| ||||||| ||||| | |||| || | | Sbjct 7458 AAATCGAATGGGTTGGTGGCACGGTAGACCTTCTCGTTTCCGAGGGCGACAAGAAGTCTG 7399 Query 794028 TCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCATGCCGATGAGCGCCACG 794087 || ||||| || ||||||||||| ||| ||| |||||||||||| | ||| || | Sbjct 7398 TCAGCGACAAACTCAATGTACTGCTTCATCAGGTTGGCGTTCATGCCCAGGAGGGCGCAG 7339 Query 794088 GGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGCCTCGA 794133 |||| || ||| | | |||||||| ||| |||| ||| || |||| Sbjct 7338 GGCAACGCCTCCGTAAGAAACTCTTGCTCAATCTTGACAGCATCGA 7293 Score = 86.0 bits (94), Expect = 1e-10 Identities = 67/80 (84%), Gaps = 0/80 (0%) Strand=Plus/Minus Query 794587 TCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTTTTCGATGGCG 794646 ||||||| ||| |||||||| ||||||||||| ||||| ||||| ||||| || || | Sbjct 6901 TCCTTGATGTACGTGTCGATCAGGAGCGAGTAAGTCTCGGAGTGAATGTTCTCCATCATG 6842 Query 794647 ATCTGGAAGCCATAAAAGCA 794666 ||||||||||| || ||||| Sbjct 6841 ATCTGGAAGCCGTAGAAGCA 6822 >seq914 Length=63143 Score = 104 bits (114), Expect = 4e-16 Identities = 150/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 2071801 AGGCCGGGCGCCTCGGACGGGCAAAAGAGCGACCAGTCGCCGCCAGTCACCACGCGGCGC 2071860 ||||| || |||| |||||| | | | |||||||||| || | ||||| | Sbjct 31278 AGGCCAGGGCACTCGTTCGGGCACATCAAGGTCCAGTCGCCGTTTTTCTCAACGCGCTTC 31219 Query 2071861 ATAAACAGGTCGCACGTCCACAGGCCGTAAAAGAGATCGCGCGCCCGGTTCTCCTCCTTG 2071920 || ||||| || |||| || || || || || || || || |||||||||| Sbjct 31218 ATGAACAGATCAGGGATCCAAAGAGCGAGGAACAGGTCACGGGCACGAATCTCCTCCTTT 31159 Query 2071921 CCGTGGTTCTTTTTCAGGTCGAGCCAGTCGACGAGGTCGGCGTGCCACGGCTCCAGGTAG 2071980 ||||||||||| | |||||||| | |||| || || |||||||||||||| |||||| Sbjct 31158 CCGTGGTTCTTCCTTAGGTCGAGGAACTCGAAGACATCTGCGTGCCACGGCTCAAGGTAG 31099 Query 2071981 CAGGCAAAGGCGCCCTTGCGCTTGCCGCCGCC 2072012 ||||||||| || ||||||| ||| || Sbjct 31098 ATGGCAAAGGCACCGGGGCGCTTGTTGCCACC 31067 >seq370 Length=160076 Score = 102 bits (112), Expect = 1e-15 Identities = 170/246 (69%), Gaps = 0/246 (0%) Strand=Plus/Minus Query 2019195 CTGCCGCCCGGCCGCCACAAGGTGATCATCCTCGATGAGGCCGACTGCCTTACGTCGGCG 2019254 || ||||| ||||| || ||| || | || || || ||||||||| || | || || | Sbjct 7558 CTCCCGCCAGGCCGACATAAGCTGGTGATTCTTGACGAGGCCGACAGCATGACATCTGGC 7499 Query 2019255 GCCCAGCAGGCCCTCCGATCGACCATGGAAAAGTACACCAACACGACGCGGTTTGCGCTG 2019314 || ||||||||||| | || ||||| | ||| ||||||| ||| | || || | Sbjct 7498 GCACAGCAGGCCCTGAGGCGAACTATGGAGATCTACTCCAACACTACGAGATTCGCTTTC 7439 Query 2019315 GCCTGCAACACGTCGTCGATGGTCATCGAAGCCCTCCAGAGCCGTTGCGCCATCTTGCGC 2019374 || |||||| ||| | |||| || |||| ||| || ||||||||| | || Sbjct 7438 GCGTGCAACCAGTCAAACAAAATCATAGAGCCCCTGCAGTCTCGATGCGCCATCCTCCGG 7379 Query 2019375 TTTGCGCGCCTCACCGACGCCCAGATCGCCGCGCGTCTGCGCGAGATTATCGACGCCGAA 2019434 | |||||||| || ||||||||| | | | || || | |||| || || ||||| Sbjct 7378 TACGCGCGCCTGACGGACGCCCAGGTGGTCAAACGGCTACTGCAGATCATTGAGGCCGAG 7319 Query 2019435 AAGGTC 2019440 |||||| Sbjct 7318 AAGGTC 7313 >seq1210 Length=27308 Score = 89.7 bits (98), Expect = 8e-12 Identities = 78/97 (80%), Gaps = 0/97 (0%) Strand=Plus/Plus Query 2175076 TGCCGTCGGTGCCGTTTTTAAACCCGACCGGCAACGGCAGCGCCGACGCCATTTCGCGGT 2175135 |||||||||||||||| || || ||||| || |||| || | || |||| ||||||| Sbjct 15257 TGCCGTCGGTGCCGTTCTTGAAGCCGACGGGGAACGATAGGCCAGAGGCCAGCTCGCGGT 15316 Query 2175136 GCACCTGGCTCTCGGTGGTGCGCGCGCCCACGGCGCC 2175172 | | |||||||||||||||||| || || || ||||| Sbjct 15317 GAAGCTGGCTCTCGGTGGTGCGGGCACCGACTGCGCC 15353 >seq248 Length=66572 Score = 89.7 bits (98), Expect = 8e-12 Identities = 94/121 (78%), Gaps = 2/121 (2%) Strand=Plus/Plus Query 2233091 GTCGCCTTTCCCACCGAGACCGTCTATGGCCTCGGCGCCGACGCGGCGT-CAGACGAGGC 2233149 |||| ||| || |||||||| || ||||| ||||| || ||||| | ||| || || Sbjct 25523 GTCGGCTTCCCAACCGAGACGGTTTATGGTCTCGGAGCAGACGCCACACGCAG-CGCTGC 25581 Query 2233150 CGTACAGCGCATCTTTGACGCCAAGGGCCGACCGTCCAACAACCCGATCATCGTGCACGT 2233209 ||| | |||||| || |||||||| || |||||| |||||||| ||||||||||||| Sbjct 25582 CGTCAGGGGCATCTATGCTGCCAAGGGTCGGCCGTCCGACAACCCGCTCATCGTGCACGT 25641 Query 2233210 G 2233210 | Sbjct 25642 G 25642 >seq1170 Length=72169 Score = 86.0 bits (94), Expect = 1e-10 Identities = 73/90 (81%), Gaps = 0/90 (0%) Strand=Plus/Minus Query 1485471 GTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCAT 1485530 ||||||||| || |||||||||||||| || ||||||||| |||| || || ||| ||| Sbjct 61615 GTACTTGGTAACAGCCTTGGTACCCTCAGACACGGCGTGCTTGGCAAGCTCACCGGGCAA 61556 Query 1485531 GATCAGGCGCACGGCGGTCTGGATCTCGCG 1485560 ||| || | || | |||||||||||| || Sbjct 61555 GATAAGCCTGACCGAGGTCTGGATCTCACG 61526 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916104709084748