Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F002218465.1_202017-07-14] 1,332 sequences; 41,771,944 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq914 187 3e-42 seq1272 104 3e-17 seq873 89.7 6e-13 >seq914 Length=63143 Score = 187 bits (206), Expect = 3e-42 Identities = 1121/1775 (63%), Gaps = 41/1775 (2%) Strand=Plus/Plus Query 104222 CCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTC 104281 |||||| ||||| ||||||| || || | ||||| || || ||||||| ||| Sbjct 30701 CCACAGCACATGATCATGCGTGTTGCTGTAGGTATCTGGGGTGACAACATTGAGCGAGTC 30760 Query 104282 TTGGAGACATACGACAAGATGTCCCAAGGTA--TGTTCATTCACGCAACACCAACCCTCT 104339 | || || ||| || ||||| || | | |||| ||||| | || || || | Sbjct 30761 ATCGAAACCTACAACCTTATGTCT--AGCAAATTCTTCACACACGCCTCCCCGACGCTTT 30818 Query 104340 TCAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGG 104399 |||| || || ||||| | || |||| |||||||| | | | ||||| | Sbjct 30819 TCAACGCCGGCACACCGCAGGCTCAGTTGTCGTCATGCTTCCTGGTTGATATGAAGGACG 30878 Query 104400 ACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTG 104459 || || | || ||||| | || || | | ||||| ||||| ||| ||||| Sbjct 30879 ACAGCATTGAGGGAATCTACGACACCCTCAAGACTTGTGCCATGATCTCCAAGATGGCTG 30938 Query 104460 GGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTAT-TCGGGGG-AC 104517 | ||||| || | || ||||| | | |||| | ||| ||| ||| || || Sbjct 30939 GCGGTATCGGTCTCAACGTCCATCGCATCCGTGCCACTGG--CTCCTATATCGCCGGTAC 30996 Query 104518 AAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTA 104577 || || || | || ||| |||| ||||| || || || ||| |||||| ||||| Sbjct 30997 CAACGGCACCTCGAACGGCATTGTTCCCATGCTGCGTGTGTTCAACAACACAGCTCGCTA 31056 Query 104578 TGTAAATCAAGCTGGGCGTCGAAAG----GGATCTATCGCAGTCTATCTTGAGCCATGGC 104633 || | || | ||| | | | | || | | || |||| |||||||| |||| Sbjct 31057 CGTCGACCAGGGTGG-CAACAAGCGCCCCGGTGCCTTTGCCATCTACCTTGAGCCGTGGC 31115 Query 104634 ACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGT 104693 |||| ||| || | |||||||| || | | ||||| || | |||||| || Sbjct 31116 ACGCAGATGTCTTCGAGTTCCTCGACCTAAGGAAGAACCACGGAAAGGAGGAGATTCGTG 31175 Query 104694 GCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGA 104753 ||| || || ||| |||||| ||||| || ||||| ||||||||| | |||||| | | Sbjct 31176 CCCGTGACCTGTTCCTCGCTCTTTGGATCCCTGATCTGTTCATGAAGCGCGTTGAGAAAA 31235 Query 104754 GTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGGGTG 104813 ||| | ||| | | | || || || || ||||| ||| | || | |||| Sbjct 31236 ACGGCGACTGGACCTTGATGTGCCCGAACGAGTGCCCTGGCCTCGCGGACTGCTACGGTG 31295 Query 104814 AGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGC--GACGGT 104871 | ||||| || || || || ||||| ||| | | ||| || | | || |||| | Sbjct 31296 AAGAGTTCGAGGCTCTGTATGAGAAGTATGAGCAGGCCGGTAAGG-GTC-GCAAGACGAT 31353 Query 104872 GCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCAT 104930 | || | || | ||| | | || || || |||| || |||||||||| || | Sbjct 31354 -CAAGGCCCAGAAACTTTGGTACTCCATCCTGGAGGCTCAGACTGAGACTGGTAACCCGT 31412 Query 104931 ACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCA 104990 |||||| ||||| || ||| |||| ||||| || || ||||| | ||| || Sbjct 31413 TCATGCTGTACAAGGATCACTGCAACCGCAAGAGCAACCAGAAGAACCTTGGTACCATTC 31472 Query 104991 AGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGT 105050 || ||||| ||||| || || || | || | | | | || ||| ||||| | Sbjct 31473 GCAGCTCCAACCTCTGCACGGAGATTATCGAGTACTCTGCCCCTGACGAGGTTGCTGTAT 31532 Query 105051 GTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGAT--CCAGAGACAAAGACATTTGA 105108 | ||||| || || | ||||| ||| ||| || || ||| | | || || || Sbjct 31533 GCAACCTTGCTTCCCTGGCTCTGCCCCAGTTCGTCGACTACCACA-AGGGTGA-ATACGA 31590 Query 105109 TTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTATTGA 105168 | ||| |||||||| || || || || || ||||| |||| | || || Sbjct 31591 CTTTGAGAAACTCCATGAGGTCACTCAAGTCGTTGTTCGCAACCTCAACAAGATCATCGA 31650 Query 105169 TAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGG 105228 || | |||||||| || || || || || ||| | ||| | || || || Sbjct 31651 AGTCAACTACTACCCCGTCCAGGAGGCACGCAACAGCAACATGCGCCACAGGCCTATCGG 31710 Query 105229 TCTCGGTGTTCAGGGTCTCGCGGATGTATTCATT---CTTTGTCGCCACGCATTTGATTC 105285 ||| || || || ||||| || || | ||| || || ||| | | || || || Sbjct 31711 TCTGGGCGTCCAAGGTCTGGCTGACGCTTTCCTTGCACTCCGTCTGC---CTTTCGAGTC 31767 Query 105286 CGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTCTTGA 105345 || || || |||| | || ||||||||||| || ||||| ||||| Sbjct 31768 TCCTGAGGCTCGTGATCTCAACAAGAAGATCTTTGAGACCATCTACCACGCTGCTCTGAC 31827 Query 105346 GGCGAGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGC 105405 || || || ||||||||| | |||||||| || | ||||| ||||| | Sbjct 31828 TGCCTCTTGCAAGCTGGCAGAGGAGCAGGGTCCATACTCGACATACGAGGGATCTCCTGT 31887 Query 105406 TTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCTTCACTACGACTG 105465 |||||| || | || || | ||| |||||| | | || || | || ||||| Sbjct 31888 TTCACAGGGCATTCTCCAGTATGACATGTGGAACGTCAAGCCCTCAGACCTCTGGGACTG 31947 Query 105466 GGAAGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCCTCATGGCTCC 105525 ||| |||||||||| ||||||| | | ||| | || ||||| | ||| | || || Sbjct 31948 GGACGCTCTCAAGGCCAACATCAAGCAACATGGTGTCCGCAACAGCTTGCTCGTTGCCCC 32007 Query 105526 AATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTACAC 105585 ||||| ||||| ||| | |||||| | || || || || |||||||| ||||| || Sbjct 32008 CATGCCTACAGCTAGCACGTCGCAAATCCTTGGCAACAACGAGTGCTTTGAGCCCTATAC 32067 Query 105586 GACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAA---CAAGCA 105642 | ||||| || | | | || || || ||||| | | ||||| | | Sbjct 32068 TTCCAACATTTACCAACGCCGTGTGCTTGCCGGCGAGTTCCAGGTAGTCAACCCCTGGTT 32127 Query 105643 TCTCGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAAGGATCTCATGGT 105702 ||| |||| || ||| ||||||| ||||| | || |||||| | | || | Sbjct 32128 GCTCAAGGAT---CTGGTCGAGCTTGGTCTGTGGTCAGACGACATGAAGAACCGTATCAT 32184 Query 105703 GAAAGCGGGTGGTTCCATTCAAAATATTGTGGATATTCCAAATGAAATTAAGAAGTTGTA 105762 | ||| || ||||| || || |||| || || | || | |||||| | || Sbjct 32185 CGCCGAGGGAGGCTCCATCCAGAACATTGCCAGCATCCCTGAGGATACCAAGAAGCTCTA 32244 Query 105763 CCGCACAGTTTGGGAAATCAAGATGAAGGA-TGTCATTGACATGGCCGCAGATCGTGGTC 105821 | || |||||||| ||| | | | | ||| || | |||||||| || |||||| Sbjct 32245 CAAGACTGTTTGGGAGATCTCG-CAACGTACCGTCGTTCAGATGGCCGCTGACCGTGGTG 32303 Query 105822 GCTTCATTGATCAAAGTCAAAGT--ATGAATCTCTTCATGGAAAGTCCAACGATGTCCAA 105879 ||||||||| | |||| ||| | || || |||| || || ||| ||| Sbjct 32304 CCTTCATTGACC--AGTCCCAGTCGCTCAACATCCACATGCGCGACCCGACCATGGGCAA 32361 Query 105880 GCTCTCTTCTATGCACATGTACAGTTGGAAGAAGGGTCTCAAAACGGGGATGTATTACCT 105939 | || | || ||||| | | | |||||| |||||||| || || ||||| ||||| Sbjct 32362 GATCACCTCGATGCATTTCACCGGCTGGAAGCTTGGTCTCAAGACCGGTATGTACTACCT 32421 Query 105940 CCGATCTAAGGCAAAGGCGCGCCCAATTCAGTTCA 105974 || | ||||| || | || |||||||||| Sbjct 32422 GCGGACGCAGGCAGCCGCCCAGCCGATTCAGTTCA 32456 >seq1272 Length=8301 Score = 104 bits (114), Expect = 3e-17 Identities = 161/226 (71%), Gaps = 8/226 (4%) Strand=Plus/Plus Query 94734 AGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTT---GATACAAAGTC 94790 ||| || || || | ||||| || || |||||| ||| |||| | || | ||||| Sbjct 7009 AGTCCCCTGCATCCGCAAGAAGGCCGACTGGGCTCTGAGGTGGATCACCGACAAGAAGTC 7068 Query 94791 GCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGT-GTTGAGGGTATCTTCTTCTCTG 94849 ||||||| ||| || |||| || || ||| || ||||||||||||||| | Sbjct 7069 AA---CCTTTGCCACGCGCCTGATCGCTTTCGC-TGTCGTCGAGGGTATCTTCTTCAGCG 7124 Query 94850 GTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCT 94909 || | || | | || | |||||||||||||| || || ||||| ||||| |||| Sbjct 7125 GTGCTTTTGCCTCCATCTTCTGGCTCAAGAAGCGTGGCCTGATGCCTGGTCTGACTTTCT 7184 Query 94910 CCAACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 94955 |||||||||| ||||| ||||| ||||| || ||| || ||||| Sbjct 7185 CCAACGAGCTCATCTCGCGTGATGAGGGTCTACACACCGACTTTGC 7230 >seq873 Length=147014 Score = 89.7 bits (98), Expect = 6e-13 Identities = 211/317 (67%), Gaps = 4/317 (1%) Strand=Plus/Plus Query 9704 GCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGCGACTTCAAAGAGA 9763 ||||| || || || ||||||| |||||| || | || ||| || | | || || Sbjct 25847 GCATCGATTTCGTCGATGAAGATGATGCAAGGAGCGTGTTTGCGCGCCTCCTTGAACAGG 25906 Query 9764 TCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTG--CGGCGGAAC 9821 || || ||||| || || ||||| |||||||| || || || | || | | || Sbjct 25907 TCTCGCACACGAGACGCACCGACACCGACAAACATTTCGACGAACTCTGAACCACTGACG 25966 Query 9822 ATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCG 9881 | || |||||| || || ||||| || | || ||| | ||| |||||||||| Sbjct 25967 CT--GAAGAAGGGCACGCCCGACTCACCGGCCGTAGCCTTGGCCAAAAGCGTCTTACCCG 26024 Query 9882 TACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCCACTTCCAAAGTATC 9941 | ||||| ||| | || | |||||| ||||||||||||||||| | || | | Sbjct 26025 TTCCTGGAGGACCGGACAGAATGGCACCACGTGGAATCTTGGCGCCCAACCGAACGAACT 26084 Query 9942 TCTCAGGTTGCTTAAGAAAATCCACAATTTCTTCCAATTCATCTTTGGCGGCGTCAATCC 10001 |||| ||| ||| || || ||||| ||| | | |||| ||||| ||||| | Sbjct 26085 TCTCCGGTGTCTTCAGGAAGCTCACAAATTCGACAATTTCAAGCTTGGCCTCGTCAGCAC 26144 Query 10002 CCTCAACATCGGTAAAC 10018 | | || |||| |||| Sbjct 26145 CGGCTACGTCGGCAAAC 26161 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583251088707680