Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F002218465.1_202017-07-14]
1,332 sequences; 41,771,944 total letters
Query= NC_030230.1
Length=372707
Score E
Sequences producing significant alignments: (Bits) Value
seq1227 179 9e-40
seq1287 116 9e-21
seq227 114 3e-20
>seq1227
Length=54087
Score = 179 bits (198), Expect = 9e-40
Identities = 173/222 (78%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551
||| || | |||||| | ||| ||||| ||||| ||||||| ||||| |||| || ||
Sbjct 23175 ACGCAGACGCAGGACCAAGTGCAGAGTAGATTCCTTTTGGATGTTGTAGTCGGACAGCGT 23116
Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611
| ||||| || | |||||| ||||||||||| ||||| |||||||| || ||||||||
Sbjct 23115 GCGTCCATCCTCCAACTGCTTTCCAGCGAAGATCAGTCGCTGTTGGTCCGGAGGAATACC 23056
Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671
||||||||||||||||| || ||| || || |||||||| | || || || ||
Sbjct 23055 CTCCTTGTCTTGGATCTTGGATTTAACATTGTCAATCGTGTCTGAAGACTCGACCTCCAA 22996
Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
|||||| ||||||||||||||||| || | ||| | |||||
Sbjct 22995 CGTGATGGTCTTGCCCGTCAAAGTCTTGACGAAGATCTGCAT 22954
Score = 149 bits (164), Expect = 1e-30
Identities = 166/222 (75%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551
|||||| | || |||||||| ||||| || || || || | ||||||||| | || ||
Sbjct 23403 ACGAAGACGGAGCACAAGGTGCAGAGTCGACTCCTTCTGAATATTGTAATCAGACAGGGT 23344
Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611
|| ||||| || |||||||| || || ||||| | ||||||||||| ||||| |||||
Sbjct 23343 TCGTCCATCCTCCAGCTGCTTGCCCGCAAAGATCAAACGTTGTTGGTCAGGCGGGATACC 23284
Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671
||||||||||| |||||| || || ||||| |||||||| | ||| || || |
Sbjct 23283 CTCCTTGTCTTGAATCTTTGATTTGACGTTGTCGATTGTGTCTGAAGATTCAACTTCGAG 23224
Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
||||| || ||||| || | || || | ||| | ||||||
Sbjct 23223 TGTGATGGTTTTGCCGGTAAGCGTCTTGACGAAGATTTGCAT 23182
Score = 143 bits (158), Expect = 6e-29
Identities = 159/212 (75%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
||||| | ||||| ||| || ||||||| ||||| |||| | || | || ||
Sbjct 22937 AGGACCAAATGGAGGGTGCTCTCCTTTTGGATGTTGTAGTCGGAAAGGGTCCGACCGTCC 22878
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| |||||||| |||||||| ||||| ||||||||||| || |||||||| ||||||||
Sbjct 22877 TCAAGCTGCTTTCCAGCGAAAATAAGGCGTTGTTGGTCCGGAGGAATACCCTCCTTGTCC 22818
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
|||||||| ||| ||| |||||||| || |||| || || || || || ||||||
Sbjct 22817 TGGATCTTCGACTTTACATTGTCGATGGTATCGGAGGACTCGACCTCCAAGGTAATCGTC 22758
Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
||||| || | ||||| | ||| | |||||
Sbjct 22757 TTGCCAGTGAGGGTTTTGACGAAAATCTGCAT 22726
Score = 96.9 bits (106), Expect = 8e-15
Identities = 134/188 (71%), Gaps = 0/188 (0%)
Strand=Plus/Minus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
|| || ||||||||||| || || |||| ||||| |||| | || | || ||
Sbjct 22709 AGCACGAGGTGGAGAGTACTCTCCTTCTGGATGTTGTAGTCGGAAAGTGTCCGACCGTCC 22650
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| || ||||| || || || ||||| || |||||||| || || ||||| ||||||||
Sbjct 22649 TCGAGTTGCTTGCCGGCAAAAATAAGACGCTGTTGGTCCGGAGGGATACCCTCCTTGTCC 22590
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
|||||||| ||| || |||||||| || | ||||| || | ||||| |||
Sbjct 22589 TGGATCTTCGACTTGACGTTGTCGATGGTATCGCTAGACTCCACCTCGAGGGTGATGGTC 22530
Query 225682 TTGCCCGT 225689
||||| ||
Sbjct 22529 TTGCCAGT 22522
>seq1287
Length=163115
Score = 116 bits (128), Expect = 9e-21
Identities = 159/222 (72%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551
||| || | ||| || |||||||| ||| || || |||| ||||| |||| | ||
Sbjct 122566 ACGCAGACGCAGCACGAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGGGT 122625
Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611
|| || || || |||||||| || || ||||| | || || ||||| || || |||||
Sbjct 122626 CCTGCCGTCCTCAAGCTGCTTGCCGGCAAAGATCAAGCGCTGCTGGTCCGGGGGGATACC 122685
Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671
|||||||| |||||||| ||| ||| ||||||||||| | ||||| || |
Sbjct 122686 CTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGCTCGACTCCACCTCAAG 122745
Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
||||| ||||||||||| | || || | ||| | |||||
Sbjct 122746 GGTGATAGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 122787
>seq227
Length=34866
Score = 114 bits (126), Expect = 3e-20
Identities = 194/276 (70%), Gaps = 9/276 (3%)
Strand=Plus/Minus
Query 7446 ATATTTAATATTTGGTGGCTTTTCTGGTATTAT-AGGTACTATATTTTCTATGATTATAA 7504
|||||||||||||| | ||||| || ||||| ||||||| ||||| | | ||||
Sbjct 27704 ATATTTAATATTTGCTCTATTTTCCGG-ATTATTAGGTACTGCGTTTTCAGTACTGATAA 27646
Query 7505 GGTTAGAATTAGCTGCTCC--GGGTTCTCAAATATTGAGTGGTAATAGCCAACTTTACAA 7562
| | || || || || |||| | ||||| || || ||| ||| | || ||
Sbjct 27645 GAATGGAGCTAAGTGGACCAGGGGTAC---AATATATAGCGG--ATAATCAATTATATAA 27591
Query 7563 CGTTATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTATGCCGGTTATGAT 7622
||| || || || || || | | |||||||| || | |||||||| | | | ||
Sbjct 27590 TAGTATAATAACAGCTCACGCTATATTAATGATTTTTTTCATGGTTATGCCAGCTTTAAT 27531
Query 7623 AGGCGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGATATGGCTTTTCC 7682
||| ||||| || |||| || | ||||||||||| || | ||||||||||| || ||
Sbjct 27530 AGGTGGTTTTGGTAATTTCTTAATGCCTTTAATGATAGGAGGGCCTGATATGGCATTCCC 27471
Query 7683 AAGGCTTAACAATATAAGTTTTTGATTACTACCGCC 7718
|| || || ||||| |||||||||||| |||| ||
Sbjct 27470 TAGACTAAATAATATTAGTTTTTGATTATTACCACC 27435
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1192510847964408
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |