Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F002218475.1_202017-07-14] 1,038 sequences; 42,988,316 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq392 134 1e-26 seq178 125 7e-24 seq47 125 7e-24 >seq392 Length=56789 Score = 134 bits (148), Expect = 1e-26 Identities = 167/229 (73%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 |||||| || | ||| || || ||||| | ||| ||||||||| |||||||| ||| Sbjct 21455 GCCACCACGGAGACGAAGGACCAAATGGAGGGTGCTCTCCTTTTGGATGTTGTAGTCGGA 21396 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | ||| || |||||| |||||||| || ||| | || | || || ||||||||||| Sbjct 21395 AAGGGTCCGACCGTCCTCAAGCTGCTTTCCAGCGAAAATAAGGCGTTGTTGGTCCGGAGG 21336 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 || || || ||||| ||| ||| ||| | | || | ||||||| |||||||| Sbjct 21335 AATACCCTCCTTGTCCTGGATCTTCGACTTTACATTGTCGATGGTATCGGAGGACTCGAC 21276 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 || | ||||| || || || || || ||||| ||||||||||||||| Sbjct 21275 CTCCAAGGTAATCGTCTTGCCAGTGAGGGTTTTGACGAAAATCTGCATG 21227 Score = 105 bits (116), Expect = 6e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||| |||||| || || || | || || |||||||| |||||||| ||| | Sbjct 21682 CCACCACGCAGACGCAGGACCAAGTGCAGAGTAGATTCCTTTTGGATGTTGTAGTCGGAC 21623 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| ||||| | |||||| || ||| |||| | ||||| ||||||||||| Sbjct 21622 AGCGTGCGTCCATCCTCCAACTGCTTTCCAGCGAAGATCAGTCGCTGTTGGTCCGGAGGA 21563 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| || || | | || | || || | ||||||| Sbjct 21562 ATACCCTCCTTGTCTTGGATCTTGGATTTAACATTGTCAATCGTGTCTGAAGACTCGACC 21503 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 || | || | ||| || || || | ||| || ||||| ||||||||| Sbjct 21502 TCCAACGTGATGGTCTTGCCCGTCAAAGTCTTGACGAAGATCTGCATG 21455 Score = 102 bits (112), Expect = 8e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 || || || | ||| ||||| | || | ||||||||||| ||||| |||||||| | Sbjct 21910 CCGCCACGAAGACGGAGCACAAGGTGCAGAGTCGACTCCTTCTGAATATTGTAATCAGAC 21851 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||| || ||||| ||||||||||| || |||| ||||| || ||||| || ||| Sbjct 21850 AGGGTTCGTCCATCCTCCAGCTGCTTGCCCGCAAAGATCAAACGTTGTTGGTCAGGCGGG 21791 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTG-CTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 || || || ||||| ||| | | || |||| | || | || || | || || | Sbjct 21790 ATACCCTCCTTGTC-TTGAATCTTTGATTTGACGTTGTCGATTGTGTCTGAAGATTCAAC 21732 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| || | |||||| ||||| || || || ||||| || ||||| Sbjct 21731 TTCGAGTGTGATGGTTTTGCCGGTAAGCGTCTTGACGAAGATTTGCAT 21684 Score = 89.7 bits (98), Expect = 5e-13 Identities = 142/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 |||||| || | || ||||| | || | || |||||| || |||||||| ||| Sbjct 21227 GCCACCACGGAGGCGGAGCACGAGGTGGAGAGTACTCTCCTTCTGGATGTTGTAGTCGGA 21168 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | || || |||||| || |||||||| || | || | |||||| ||||||||||| Sbjct 21167 AAGTGTCCGACCGTCCTCGAGTTGCTTGCCGGCAAAAATAAGACGCTGTTGGTCCGGAGG 21108 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 ||| || || ||||| ||| ||| ||||| | || | |||||| | ||||| | Sbjct 21107 GATACCCTCCTTGTCCTGGATCTTCGACTTGACGTTGTCGATGGTATCGCTAGACTCCAC 21048 Query 131187 GTCGACGGTAACGGTTTTACCGGT 131210 |||| ||| | ||| || || || Sbjct 21047 CTCGAGGGTGATGGTCTTGCCAGT 21024 >seq178 Length=143430 Score = 125 bits (138), Expect = 7e-24 Identities = 165/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||| ||||||||| | || | ||| |||||| || |||||||| ||| | Sbjct 102903 CCACCACGCAGACGCAGCACGAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAC 102962 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||| | |||||| ||||||||||| || |||| || |||||||||||||| ||| Sbjct 102963 AGGGTCCTGCCGTCCTCAAGCTGCTTGCCGGCAAAGATCAAGCGCTGCTGGTCCGGGGGG 103022 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| || ||||| | || | || ||| | ||||| | Sbjct 103023 ATACCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGCTCGACTCCACC 103082 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATGA 131236 || | ||| | || || || || || || || ||||| |||||||||| Sbjct 103083 TCAAGGGTGATAGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCATGA 103131 >seq47 Length=1018084 Score = 125 bits (138), Expect = 7e-24 Identities = 405/618 (66%), Gaps = 13/618 (2%) Strand=Plus/Minus Query 145869 CCTCAAACGCGGAACCGTAGCAATCGGACAGGCCGGGACACTTGTTGGGACACATCAGCG 145928 |||| ||| | ||||||||| || | ||||| || |||| ||| || ||||||| | Sbjct 125135 CCTCGAACTCTTCACCGTAGCAGTCCGCGAGGCCAGGGCACTCGTTCGGGCACATCAAGG 125076 Query 145929 ACCATACGCCGTTGGCGTTGACGCGCTCCATAAACAAATCTGGCACCCACAGCGCGTACA 145988 ||| ||||||| | ||||||| ||| |||| ||| || | ||| || ||| | Sbjct 125075 TCCAGTCGCCGTTTTTCTCAACGCGCTTCATGAACAGATCAGGGATCCAAAGAGCGAGGA 125016 Query 145989 TCAAGTCGCGCGCTTTGCAATCCTCAGCACCCATGTTTCGCTTCAAATTAAGCACACTAT 146048 || ||| || || ||||| || ||| | | | | || | ||| Sbjct 125015 ACAGGTCACGGGCACGAATCTCCTCCTTTCCGTGGTTCTTCCTTAGGTCGAGGA-ACTCG 124957 Query 146049 A-GATGTCCGCGTGCCACGGTTCAATATAGACGGCGAGGGCTCCTTTTCGTTTG---CCA 146104 | || || ||||||||||| |||| |||| ||| | ||| || || ||| ||| Sbjct 124956 AAGACATCTGCGTGCCACGGCTCAAGGTAGATGGCAAAGGCACCGGGGCGCTTGTTGCCA 124897 Query 146105 CCCTGGTCCACGTGACGTACCATGTTGTTAAAGACGCGCACCATGGGCTCGACGCCGCTG 146164 |||||||| |||| || | ||||||| || || |||| |||||| | | |||| | Sbjct 124896 CCCTGGTCGACGTAGCGAGCTGTGTTGTTGAACACACGCAGCATGGGAACAATGCCGTTC 124837 Query 146165 GCTACGCCGTTCGTAGAGTTTATTCTGGTGCCGCGGGAGCGCACGCAATGAACATTCACG 146224 | |||||| ||| | || || ||| || || | || ||| || || | Sbjct 124836 GAGGTGCCGTTGGTACCGGCGATATAGGAGCCAGTGGCACGGATGCGATGGACGTTGAGA 124777 Query 146225 CCGAGACCGCC-GCCGTACTTGGATATAGCGGCGC-AGTCGCCGAGCGTCTCGTAGATGC 146282 |||| |||||| ||| | |||||| || ||| | |||| ||| || |||||||| | Sbjct 124776 CCGATACCGCCAGCCAT-CTTGGAGATCATGGCACAAGTC-TTGAGGGTGTCGTAGATTC 124719 Query 146283 CGTCAATGCTATCG--CTTCGAATGCCGAGCAGAAAGCACGAGCACATCTGCGCCATCGG 146340 | |||||||| ||| |||| || | | ||| ||||| || ||| ||| ||| ||| Sbjct 124718 CCTCAATGCTGTCGTCCTTC--ATATCAACCAGGAAGCATGACGACAACTGAGCCTGCGG 124661 Query 146341 CGTCCCCGCCGAGAACAACGTCGGGCTCGCGTGCGTAAACATTTTTCGGCTCATCATCCG 146400 || || || ||| | ||||||| ||||| || || | ||| | ||| | Sbjct 124660 TGTGCCGGCGTTGAAAAGCGTCGGGGAGGCGTGTGTGAAGAATTTGCTAGACATAAGGTT 124601 Query 146401 ATACGTTTCGATAGCGTCTTGAATGTCGTCGCCATGAATGCCCAAAGCGACGCGCATGAG 146460 || |||||||| | | ||||| ||| || || || | ||| || ||||||| Sbjct 124600 GTAGGTTTCGATGACTCGCTCAATGTTGTCACCCCAGATACCTACAGCAACACGCATGAT 124541 Query 146461 CATGTGTTGGGGCCGCTC 146478 |||||| || |||| ||| Sbjct 124540 CATGTGCTGTGGCCTCTC 124523 Score = 105 bits (116), Expect = 6e-18 Identities = 159/226 (70%), Gaps = 0/226 (0%) Strand=Plus/Minus Query 145058 TTGACGACCTGAAACTCGCCGGCCAACACACGACGCAAATACACGTTAGACGTGAAGGGT 145117 ||||| ||||| ||||||||||| | |||||| || || | ||| || || |||| Sbjct 125946 TTGACTACCTGGAACTCGCCGGCAAGCACACGGCGTTGGTAAATGTTGGAAGTATAGGGC 125887 Query 145118 TCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGCATGTACGCCACC 145177 ||||| ||||||| ||||| |||||||| | || | || || |||||| || || Sbjct 125886 TCAAAGCACTCGTTGTTGCCAAGGATTTGCGACGTGCTAGCTGTAGGCATGGGGGCAACG 125827 Query 145178 AATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGCGTACCCCAATCCCAT 145237 | || ||||| | || || | |||||||| |||| || | |||| ||||| Sbjct 125826 AGCAAGCTGTTGCGGACACCATGTTGCTTGATGTTGGCCTTGAGAGCGTCCCAGTCCCAG 125767 Query 145238 AGCGAAGTCGGCCTCACGTCCCACATGTCGTACTGCAAAATGCCCT 145283 || | ||| | |||| ||||||||| ||||| | |||||||| Sbjct 125766 AGGTCTGAGGGCTTGACGTTCCACATGTCATACTGGAGAATGCCCT 125721 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472006675633920