Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F002218475.1_202017-07-14] 1,038 sequences; 42,988,316 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq35 93.3 1e-13 >seq35 Length=266143 Score = 93.3 bits (102), Expect = 1e-13 Identities = 175/256 (68%), Gaps = 6/256 (2%) Strand=Plus/Minus Query 251407 ATAAGACCACACTTATTACACACATGGACGCTGTAAGCATCAGATGCGTCATATAGCCGA 251466 || || ||||| || ||| | ||| | ||| | ||||| || | ||| | | || Sbjct 252588 ATCAGCCCACAAATACCACAGATATGCGCCCTGAACGCATCCGAAACCTCAAACAACCTC 252529 Query 251467 CCCTTGGTGAAGCGAGATGCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAA 251526 |||| |||| | ||| ||||||| |||||| |||||||| |||||||| |||||| Sbjct 252528 TCCTTCAAGAAGGAGGCTGCTCCGTGTGCAATCATGCAATCACGTTCCATTTCTCCGAAA 252469 Query 251527 CGAAGACCACCATCGCGAGCCCTACCCTCGGCAGGCTGACGAG---TGAGATTAACCATA 251583 || ||||||||||| || || | |||||| | ||||| | | ||| || || Sbjct 252468 CGCAGACCACCATCACGCGCACGACCCTCCACTGGCTGTCTTGTCATGATGTTGAC---G 252412 Query 251584 GGACCGATGGAGCGGCTATGTTGCTTATCATTTACCATATGCTTGAGACGCTGGTAGAAT 251643 ||||| | ||| || ||||| | ||||| ||| | |||||||||||| || Sbjct 252411 GGACCACGTGCTCGGGCGTGAATTTTATCGTCCACCATGTGCCTCAGACGCTGGTAGTAT 252352 Query 251644 GCGGGACCGATGAAGA 251659 | || || | ||||| Sbjct 252351 GTCGGTCCAAAGAAGA 252336 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471798025745806