Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F002218475.1_202017-07-14] 1,038 sequences; 42,988,316 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq392 158 1e-33 seq47 149 6e-31 seq178 104 2e-17 >seq392 Length=56789 Score = 158 bits (174), Expect = 1e-33 Identities = 161/210 (77%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| ||||| | || ||||| ||||| ||||| || || |||||||| ||| | | Sbjct 21684 ATGCAAATCTTCGTCAAGACGCTTACCGGCAAAACCATCACACTCGAAGTTGAATCTTCA 21743 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 |||||| | || | || ||| |||||| |||||||| || || || || || || ||| Sbjct 21744 GACACAATCGACAACGTCAAATCAAAGATTCAAGACAAGGAGGGTATCCCGCCTGACCAA 21803 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 ||||||||||||||||| || || |||||||||||| ||| | |||| ||||| || Sbjct 21804 CAACGTTTGATCTTTGCGGGCAAGCAGCTGGAGGATGGACGAACCCTGTCTGATTACAAT 21863 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTG 24913 ||||| ||||| ||||| || ||| | ||| Sbjct 21864 ATTCAGAAGGAGTCGACTCTGCACCTTGTG 21893 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || | || || || || || ||| | || || || | | Sbjct 21456 ATGCAGATCTTCGTCAAGACTTTGACGGGCAAGACCATCACGTTGGAGGTCGAGTCTTCA 21515 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || ||| |||||||||||||| || || || ||||| || ||| Sbjct 21516 GACACGATTGACAATGTTAAATCCAAGATCCAAGACAAGGAGGGTATTCCTCCGGACCAA 21575 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || ||||||| || || || ||| |||||||| | | |||| || || ||| Sbjct 21576 CAGCGACTGATCTTCGCTGGAAAGCAGTTGGAGGATGGACGCACGCTGTCCGACTACAAC 21635 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 || ||||||||||| || || |||||||| |||| |||| || || Sbjct 21636 ATCCAAAAGGAATCTACTCTGCACTTGGTCCTGCGTCTGCGTGGTGG 21682 >seq47 Length=1018084 Score = 149 bits (164), Expect = 6e-31 Identities = 957/1524 (63%), Gaps = 56/1524 (4%) Strand=Plus/Minus Query 138508 ACCTGAAATTCACCGGCCAATACTCGACGAACGTAAATGTTGTTGGTGAAAGGCTCAAAC 138567 ||||| || || ||||| | || || || |||||||||| || | |||||||| Sbjct 125940 ACCTGGAACTCGCCGGCAAGCACACGGCGTTGGTAAATGTTGGAAGTATAGGGCTCAAAG 125881 Query 138568 GATTCGTTGTTTCCCAGAATCTGAGCCGTGGTCGCGGTCGGCATGTACGCCACCAAAAGA 138627 | |||||||| || || || || | |||| | || || |||||| || || | | Sbjct 125880 CACTCGTTGTTGCCAAGGATTTGCGACGTGCTAGCTGTAGGCATGGGGGCAACGAGCAAG 125821 Query 138628 GAATTCCGTAAACCGTGAAGCTTGATTCGTT--CCTTGAGCGACGACCAGTCCCACAAAT 138685 || || | ||| || ||||||| ||| ||||||| | ||||||||| | | Sbjct 125820 CTGTTGCGGACACCATGTTGCTTGAT--GTTGGCCTTGAGAGCGTCCCAGTCCCAGAGGT 125763 Query 138686 CGCTAGGTTTTTTGTTCCACATATCGTACTGTAACATTCCC----AAACTTGCGGGACTG 138741 | || || ||||||||| || ||||| | || ||| |||| ||| Sbjct 125762 CTGAGGGCTTGACGTTCCACATGTCATACTGGAGAATGCCCTGTGAAACA----GGAGAT 125707 Query 138742 CCTTCGTACGAATCGTATACACCAAACTCTTGCGCCAACTCGTTGCTCGCCTCGAGCGCA 138801 || ||||| | |||| ||| ||| | |||| || | || || ||| Sbjct 125706 CCCTCGTATGTCGAGTATGGACCCTGCTCCTCTGCCAGCTTGCAAGAGGCAGTCAGAGCA 125647 Query 138802 CCATAGTAAATAGTTTCGGCAATCTGCTGATTGAGCAATCGGGCCTCGGCGCTCTCGTAC 138861 | | ||| || || || |||| || ||||| || ||||| | |||| | Sbjct 125646 GCGTGGTAGATGGTCTCAAAGATCTTCTTGTTGAGATCACGAGCCTCAGGAGACTCGAAA 125587 Query 138862 GGCATGCGGAGCATCGTGAACGCGTCGGCCAGCCCTTGCACGCCCACTCCGACAGGGCGA 138921 |||| ||||| ||| ||||| ||||| ||||| ||||||| |||| ||| | Sbjct 125586 GGCAGACGGAGTGCAAGGAAAGCGTCAGCCAGACCTTGGACGCCCAGACCGATAGGCCTG 125527 Query 138922 TGGCGCAGATTTGACGCTTTTGCG-GCTTC---GATAGGATAATAGTTTACATCGATGAT 138977 ||||||| || ||| ||||| || || || || || ||||| || |||||||| Sbjct 125526 TGGCGCATGTT----GCTGTTGCGTGCCTCCTGGACGGGGTAGTAGTTGACTTCGATGAT 125471 Query 138978 TTTGTTTAAATTTCGCACGACCACCTTAGTCGTATGCTTTAATCGTTCAAAATCGTATGT 139037 ||||| | || || || || || | ||| | | | | ||||| |||||| Sbjct 125470 CTTGTTGAGGTTGCGAACAACGACTTGAGTGACCTCATGGAGTTTCTCAAAGTCGTATTC 125411 Query 139038 GCCCCCGTTGTCGTCGACGACGTCGACAAATTTGTTGACACAAATCGAGGCTATGTTGCA 139097 ||| || || |||||||| | | | || || || || | |||||| Sbjct 125410 ACCCTTGTGGTAGTCGACGAACTGGGGCA-------GAGCCAGG--GAAGCAAGGTTGCA 125360 Query 139098 CACCGCCACTTCGTCGGGGTCGCTGTATTCGACAATTTCGGCACACAAATTACTACACTT 139157 || || || ||||| ||| | ||| |||| ||| || | || | || | Sbjct 125359 TACAGCAACCTCGTCAGGGGCAGAGTACTCGATAATCTCCGTGCAGAGGTTGGAGCTGCG 125300 Query 139158 GATCGTACCTAAATTTTGTTGATTGCTTTTTCGGTTACAAGCATCTTTGTAAAGCATATA 139217 || ||||| | || | || ||||| || ||||| || ||| ||||| ||||| | Sbjct 125299 AATGGTACCAAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGATCCTTGTACAGCATGAA 125240 Query 139218 CGGTGTGCCAGTTTCCACTTGTGTCTCTATAATGAATTTGAACAAGTCCCTAG--CTTGT 139275 ||| | ||||| || || | ||| | ||| | | | |||| || | |||| Sbjct 125239 CGGGTTACCAGTCTCAGTCTGAGCCTCCAGGATGGAGTACCA-AAGTTTCTGGGCCTTG- 125182 Query 139276 AT----TTGACGCACGTAAAGTTCGTCGCGCTCGTACTTTTCGTAGAGTTCGTCGAATCG 139331 || ||| | | || || | |||| ||||| || || || | ||||| Sbjct 125181 ATCGTCTTGCGACCCTTAC----CGGCCTGCTCATACTTCTCATACAGAGCCTCGAACTC 125126 Query 139332 TTCACCGTAGGCGTCAGAAAGATCGCGACACTTGTCAGGACACATGAGCGACCATACGCC 139391 |||||||||| ||| | || | | |||| || || ||||| | | ||| |||| Sbjct 125125 TTCACCGTAGCAGTCCGCGAGGCCAGGGCACTCGTTCGGGCACATCAAGGTCCAGTCGCC 125066 Query 139392 GTTCGCCTTGACGCGCCTCATGAACAGATCCGGAATCCACAAAGCGAACAGCAAATCGCG 139451 ||| || |||||| ||||||||||||| || ||||| | ||||| | || || || Sbjct 125065 GTTTTTCTCAACGCGCTTCATGAACAGATCAGGGATCCAAAGAGCGAGGAACAGGTCACG 125006 Query 139452 CGCCTTCTTATCTTCCGAACCCATGTTACGTTTCATGTTAAGGAAATCAAAAACGTCAGC 139511 || | || ||| || ||| | | || ||||| || || || || || Sbjct 125005 GGCACGAATCTCCTCCTTTCCGTGGTTCTTCCTTAGGTCGAGGAACTCGAAGACATCTGC 124946 Query 139512 GTGCCATGGTTCCAGATAGATGGCCATTGCGCCTTTCCGTTTG---CCACCTTGATCGAC 139568 |||||| || || || |||||||| | || || || ||| ||||| || ||||| Sbjct 124945 GTGCCACGGCTCAAGGTAGATGGCAAAGGCACCGGGGCGCTTGTTGCCACCCTGGTCGAC 124886 Query 139569 GTGTCGTACAGCATTATTGAATACGCGCAACATCGGCTCCAGACCGCTCGCTGTTCCGTT 139628 || || | | || ||||| || |||| ||| || | | ||| ||| || ||||| Sbjct 124885 GTAGCGAGCTGTGTTGTTGAACACACGCAGCATGGGAACAATGCCGTTCGAGGTGCCGTT 124826 Query 139629 GGTGCTACGG----ATGGGA-CTGTTGCGAGCTCGGACGTCATGTACATTGATGCCGATT 139683 ||| | ||| || ||| | || || |||| | ||| || |||| ||||| Sbjct 124825 GGTAC--CGGCGATATAGGAGCCAGTG---GCACGGATGCGATGGACGTTGAGACCGATA 124771 Query 139684 CCGCCGCCAAATTTGGATATTAAAACGCAA-TCGCGTAATGTCTCGTATATACCTCTTAT 139742 ||||| | | ||||| || | | ||| || | | || ||||| || || || Sbjct 124770 CCGCCAGCCATCTTGGAGATCATGGCACAAGTCTTG-AGGGTGTCGTAGATTCCCTCAAT 124712 Query 139743 GCTGTCGTCCTGCATCGTGACCAGAAAGCATGACGAAAGTTGCGGTAGTTTCGTGCCGGC 139802 ||||||||||| ||| ||||| ||||||||||| | || | | |||||||| Sbjct 124711 GCTGTCGTCCTTCATATCAACCAGGAAGCATGACGACAACTGAGCCTGCGGTGTGCCGGC 124652 Query 139803 TGCAAACAGAGTAGGACTCGCGTGCGTGAACATTTGTTTCGACATCAATTCGTACGTTTC 139862 || || || || ||||| ||||| | || | ||||| | | ||| ||||| Sbjct 124651 GTTGAAAAGCGTCGGGGAGGCGTGTGTGAAGAATTTGCTAGACATAAGGTTGTAGGTTTC 124592 Query 139863 GATGGCGCTCACAATATCCCTTCCGTGGATACCGACAGAGACTCGCATCAGCATATGTTG 139922 |||| | | | |||| | || |||||| |||| || ||||| | ||| || || Sbjct 124591 GATGACTCGCTCAATGTTGTCACCCCAGATACCTACAGCAACACGCATGATCATGTGCTG 124532 Query 139923 GATCCGTTCGGCCACCGCGCCCTCGAtttttttCAGATAACCGTTCTCTAGGGTCTTGTA 139982 || ||| | | | ||| | || || || ||| |||| || |||||| | Sbjct 124531 TGGCCTCTCGACAATCTTGCCATTGAGCTTCAATAGGTAAGACCTCTCGAGAGTCTTGAA 124472 Query 139983 GCCAAAGTACCTATAGTTGAAATC 140006 ||| || || ||||||||||| Sbjct 124471 GCCGAAATATTGGTAGTTGAAATC 124448 >seq178 Length=143430 Score = 104 bits (114), Expect = 2e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || || || || || ||||| || || || || || | | | Sbjct 103129 ATGCAGATCTTCGTCAAGACCCTCACGGGCAAGACTATCACCCTTGAGGTGGAGTCGAGC 103070 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||| ||||| || || || || || || || Sbjct 103069 GACACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCAG 103010 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || |||||||||||||| || ||||| ||||| || | | |||| || || ||| Sbjct 103009 CAGCGCTTGATCTTTGCCGGCAAGCAGCTTGAGGACGGCAGGACCCTGTCCGACTACAAC 102950 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGCGG 24933 || || ||||| || || ||| | ||| |||| |||| || || || Sbjct 102949 ATCCAGAAGGAGAGCACCCTCCACCTCGTGCTGCGTCTGCGTGGTGGTGG 102900 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449891762578640