Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Magnaporthe_20sp._20MG03_20[genbank_20GCA_5F001936055.1_202017-01-
05] 10,291 sequences; 41,129,187 total letters
Query= NC_005839.2
Length=131680
Score E
Sequences producing significant alignments: (Bits) Value
seq10044 102 7e-17
seq10256 86.0 5e-12
>seq10044
Length=21608
Score = 102 bits (112), Expect = 7e-17
Identities = 150/210 (71%), Gaps = 2/210 (1%)
Strand=Plus/Plus
Query 48518 ACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGT-CGCTCGTCCTC 48576
|| ||||| || |||||||||||||| |||||||| || | || || || |||||||
Sbjct 11063 ACCAAATGGAGGGTGCTCTCCTTTTGGATGTTGTAGTC-GGAAAGGGTCCGACCGTCCTC 11121
Query 48577 CAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCAT 48636
|||||||| || || |||| | || || || ||| || | || |||||||||
Sbjct 11122 AAGCTGCTTTCCAGCGAAAATAAGGCGTTGTTGGTCCGGAGGAATACCCTCCTTGTCCTG 11181
Query 48637 AATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTT 48696
|| ||| ||| | | | |||||||||| ||||| ||| | || || || ||
Sbjct 11182 GATCTTCGACTTTACATTGTCGATGGTATCGGAGGACTCGACCTCCAAGGTAATCGTCTT 11241
Query 48697 ACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726
|| ||||| ||||| || |||||||||||
Sbjct 11242 GCCAGTGAGGGTTTTGACGAAAATCTGCAT 11271
>seq10256
Length=36607
Score = 86.0 bits (94), Expect = 5e-12
Identities = 144/205 (70%), Gaps = 4/205 (2%)
Strand=Plus/Minus
Query 48524 TGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTC--GCTCGTCCTCCAGCT 48581
|| || ||||||||||| || |||||||| || | | ||| || ||||||| ||||
Sbjct 12648 TGGAGGGTGCTCTCCTTCTGGATGTTGTAGTC-GGAGAGGGTCCTGC-CGTCCTCAAGCT 12591
Query 48582 GCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTT 48641
|||| ||| | | || || |||||||| ||| || | || ||||||||| || |
Sbjct 12590 GCTTGCCGGCAAAGATCAAGCGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCT 12531
Query 48642 TCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGG 48701
| ||||| | | ||||| ||| | |||||| ||| | || || || || || |
Sbjct 12530 TGGACTTGACATTGTCGATGGTGTCGCTCGACTCCACCTCAAGGGTGATAGTCTTGCCCG 12471
Query 48702 TGAGAGTTTTCACAAAAATCTGCAT 48726
|||| || || || || ||||||||
Sbjct 12470 TGAGGGTCTTGACGAAGATCTGCAT 12446
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 421198366016291
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |