Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Magnaporthe_20sp._20MG03_20[genbank_20GCA_5F001936055.1_202017-01-
05] 10,291 sequences; 41,129,187 total letters
Query= NC_006549.1
Length=140131
Score E
Sequences producing significant alignments: (Bits) Value
seq10044 107 2e-18
>seq10044
Length=21608
Score = 107 bits (118), Expect = 2e-18
Identities = 154/217 (71%), Gaps = 0/217 (0%)
Strand=Plus/Plus
Query 94793 CGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAA 94852
|||| |||||||||| ||||||||||||||| | ||| || ||| || ||| |
Sbjct 10829 CGCAGGACCAAGTGCAGAGTAGATTCCTTTTGGATGTTGTAGTCGGACAGCGTGCGTCCA 10888
Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912
||||||| ||| ||||| | ||||| | || || || || ||||||||||| || ||
Sbjct 10889 TCCTCCAACTGCTTTCCAGCGAAGATCAGTCGCTGTTGGTCCGGAGGAATACCCTCCTTA 10948
Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972
|| | || || | || || | | | ||||| | ||||| || | |||||||
Sbjct 10949 TCTTGGATCTTGGATTTAACATTGTCAATCGTGTCTGAAGACTCGACCTCCAACGTGATG 11008
Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATGC 95009
|| || || || | ||| || || |||||||||||||
Sbjct 11009 GTCTTGCCCGTCAAAGTCTTGACGAAGATCTGCATGC 11045
Score = 98.7 bits (108), Expect = 9e-16
Identities = 150/212 (71%), Gaps = 4/212 (2%)
Strand=Plus/Plus
Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA--ATCC 94855
||| | ||||| ||| || ||||| || | || ||||| || | ||| | ||||
Sbjct 10606 CACAAGGTGCAGAGTCGACTCCTTCTGAATATTGTAATCAGACA--GGGTTCGTCCATCC 10663
Query 94856 TCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCA 94915
|||||||| || || ||||||| || | ||| || || || || ||||| || |||||
Sbjct 10664 TCCAGCTGCTTGCCCGCAAAGATCAAGCGTTGTTGGTCAGGCGGGATACCCTCCTTGTCT 10723
Query 94916 TAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTT 94975
| ||| |||| |||||| | ||| ||||| | || || || | |||||||||
Sbjct 10724 TGAATCTTTGATTTGACGTTGTCGATTGTGTCTGAAGATTCAACTTCGAGTGTGATGGTT 10783
Query 94976 TTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|| || ||||| || || || ||||| |||||
Sbjct 10784 TTGCCGGTAAGCGTCTTGACGAAGATTTGCAT 10815
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448233532940760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |