Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20sp._20MG03_20[genbank_20GCA_5F001936055.1_202017-01- 05] 10,291 sequences; 41,129,187 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq10044 96.9 2e-15 seq10256 87.8 1e-12 >seq10044 Length=21608 Score = 96.9 bits (106), Expect = 2e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 38091 CCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGAC 38150 ||||| | | ||| | |||||||| || |||||||||||||| || ||||| || || Sbjct 11045 CCACCACGAAGACGAAGGACCAAATGGAGGGTGCTCTCCTTTTGGATGTTGTAGTCGGAA 11104 Query 38151 AAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGG 38210 | || |||| || | || ||||| || || || ||||||||||| || | || Sbjct 11105 AGGGTCCGACCGTCCTCAAGCTGCTTTCCAGCGAAAATAAGGCGTTGTTGGTCCGGAGGA 11164 Query 38211 ACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACT 38270 | || || |||||| || || ||| ||||| | || ||||| || || Sbjct 11165 ATACCCTCCTTGTCCTGGATCTTCGACTTTACATTGTCGATGGTATCGGAGGACTCGACC 11224 Query 38271 TCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATG 38318 || || ||||| || || || || | |||||| ||||| ||||||||| Sbjct 11225 TCCAAGGTAATCGTCTTGCCAGTGAGGGTTTTGACGAAAATCTGCATG 11272 Score = 93.3 bits (102), Expect = 3e-14 Identities = 150/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 38102 ACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTC 38161 ||| | ||| | || ||||| |||||| ||||||||||||||||||| ||| | Sbjct 10600 ACGGAGCACAAGGTGCAGAGTCGACTCCTTCTGAATATTGTAATCAGACAGGGTTCGTCC 10659 Query 38162 GTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTT 38221 || || | || || || ||||| || | ||||||||| || | |||| || || || Sbjct 10660 ATCCTCCAGCTGCTTGCCCGCAAAGATCAAGCGTTGTTGGTCAGGCGGGATACCCTCCTT 10719 Query 38222 GTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAAT 38281 ||| ||| ||| || || || | || || ||| | ||||||||| | ||| || Sbjct 10720 GTCTTGAATCTTTGATTTGACGTTGTCGATTGTGTCTGAAGATTCAACTTCGAGTGTGAT 10779 Query 38282 AGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 ||||| || || | || || ||||| || ||||| Sbjct 10780 GGTTTTGCCGGTAAGCGTCTTGACGAAGATTTGCAT 10815 >seq10256 Length=36607 Score = 87.8 bits (96), Expect = 1e-12 Identities = 161/234 (69%), Gaps = 4/234 (2%) Strand=Plus/Minus Query 38090 ACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGA 38149 |||||| | || ||||| ||| | || || ||||||||||| || || ||||| || || Sbjct 12673 ACCACCACGCAGACGCAGCACGAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGA 12614 Query 38150 CAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGG 38209 | | |||| || | || || |||||||| || | ||| || || || | ||| Sbjct 12613 GAGGGTCCTGCCGTCCTCAAGCTGCTTGCCGGCAAAGATCAAGCGCTGCTGGTCCGGGGG 12554 Query 38210 GACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTAT--CTCCACTTTCA 38267 || || || |||||| || || ||| ||||| | || || | ||| || || Sbjct 12553 GATACCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGCTCGAC--TCC 12496 Query 38268 ACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATGTTT 38321 || || | || ||||| || ||||| | ||| || ||||| ||||||||| || Sbjct 12495 ACCTCAAGGGTGATAGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCATGATT 12442 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334905190398821