Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Magnaporthe_20sp._20MG03_20[genbank_20GCA_5F001936055.1_202017-01-
05] 10,291 sequences; 41,129,187 total letters
Query= NC_012639.1
Length=141291
Score E
Sequences producing significant alignments: (Bits) Value
seq10044 116 3e-21
>seq10044
Length=21608
Score = 116 bits (128), Expect = 3e-21
Identities = 154/211 (73%), Gaps = 2/211 (1%)
Strand=Plus/Plus
Query 45131 CACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTC 45190
||| || ||||| || || ||||| || ||||| ||||| | |||| ||| ||
Sbjct 10606 CACAAGGTGCAGAGTCGACTCCTTCTGAATATTGTAATCAGACAGGGTTCGTCCATCCTC 10665
Query 45191 CAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTG 45250
|| || || || || | ||||| ||||| ||||| ||||| || || || || |||||
Sbjct 10666 CAGCTGCTTGCCCGCAAAGATCAAGCGTTGTTGGTCAGGCGGGATACCCTCCTTGTCTTG 10725
Query 45251 AATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTT 45309
||| ||| ||||| || | || | ||||| ||||| || |||||||| || | ||||
Sbjct 10726 AATCTTTGATTTGA-CGTTGTCGATTGTGTCTGAAGATTCAACTTCGAGTGTGATGGTTT 10784
Query 45310 TGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
||||||| || || || || || ||||||||
Sbjct 10785 TGCCGGTAAGCGTCTTGACGAAGATTTGCAT 10815
Score = 98.7 bits (108), Expect = 9e-16
Identities = 146/205 (71%), Gaps = 4/205 (2%)
Strand=Plus/Plus
Query 45138 TGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGA--ATCGTCCAATT 45195
||||| || |||||||||||||| || || ||| ||| | | | ||| ||||| |
Sbjct 10841 TGCAGAGTAGATTCCTTTTGGATGTTGTAGTCG--GACAGCGTGCGTCCATCCTCCAACT 10898
Query 45196 GTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTT 45255
| ||||| ||| | |||| ||| || |||||||| ||||| || || |||||||| || |
Sbjct 10899 GCTTTCCAGCGAAGATCAGTCGCTGTTGGTCCGGAGGAATACCCTCCTTATCTTGGATCT 10958
Query 45256 TTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGG 45315
| ||| | || | ||||| ||||||||||| || | || | || ||||| |
Sbjct 10959 TGGATTTAACATTGTCAATCGTGTCTGAAGACTCGACCTCCAACGTGATGGTCTTGCCCG 11018
Query 45316 TTAGAGTTTTTACAAAAATTTGCAT 45340
| | ||| || || || || |||||
Sbjct 11019 TCAAAGTCTTGACGAAGATCTGCAT 11043
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 451945055438360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |