Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20sp._20MG03_20[genbank_20GCA_5F001936055.1_202017-01- 05] 10,291 sequences; 41,129,187 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq9169 168 1e-36 seq8624 141 1e-28 >seq9169 Length=10546 Score = 168 bits (186), Expect = 1e-36 Identities = 455/681 (67%), Gaps = 14/681 (2%) Strand=Plus/Plus Query 203839 CTTGTCCACCGTGAACTGAATGGCGTTCACGGCAGGCCTGCTTCT-CAGATAGTACATGC 203897 || ||| || ||||||||||| | | |||| | ||||| || ||| |||||||| | Sbjct 1274 CTGGTCGACAGTGAACTGAATCGGCTGGGCGGCTG-CCTGCGTCCGCAGGTAGTACATAC 1332 Query 203898 CGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGG 203957 ||||||| || || || ||| ||| | ||||| || | | |||| || | | | Sbjct 1333 CGGTCTTGAGACCAAGCTTCCAGCCGGTGAAATGCATCGAGGTGATCTTGCCCATGGTCG 1392 Query 203958 GGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCC-CGATCTGCG 204016 ||||| |||||| ||||| || |||||| ||||| ||||| ||| || || || ||| Sbjct 1393 GGTCGCGCATGTGGATGTTGAGCGACTGGGACTGGTCAATGAA-GGCACCACGGTCAGCG 1451 Query 204017 GCCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACA-CGTCTCTGGT 204075 ||||| | | | ||| ||||| |||||||| || |||||| | | | ||| |||| Sbjct 1452 GCCATCTGAACGACGGTACGTTGCGAGATCTCCCAAACAGTCTTGTAGAGCTTCT-TGGT 1510 Query 204076 GTGTTGAGGCACATCTTCCCACGTCCTG-ATCGAGCCGTTGTCGGCCATCAGTCTCATCC 204134 | | ||| | || | | || ||| || ||||| ||||| || | | || Sbjct 1511 ATCCTCAGGGATG-CTGGCAATGTTCTGGATGGAGCCTCCCTCGGCGATGATACGGTTCT 1569 Query 204135 TCGTCTCCTCCCCCCACATGCCCAACCT-GATCAGCTCCCGCACCAGGTGGGGGTTGATG 204193 || | || || ||||| | |||| || || ||| ||| | || |||||||| Sbjct 1570 TCATGTCGTCTGACCACA-GACCAAGCTCGACCAGATCCTTGAGCAACCAGGGGTTGACT 1628 Query 204194 ATCTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGAAC 204253 | ||| || || |||| ||||| | || | | | |||| || | || || || Sbjct 1629 ACCTGGAACTCGCCGGCAAGCACACGGCGTTGGTAAATGTTGGAAGTATAGGGCTCAAAG 1688 Query 204254 GCCTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCAGG 204313 |||||||||||| | || || | ||||| || || |||||||| || | ||||| | Sbjct 1689 CACTCGTTGTTGCCAAGGATTTGCGACGTGCTAGCTGTAGGCATGGGGGCAACGAGCAAG 1748 Query 204314 GAGTTGCGCACACCGTATTTTTGGACCCTGCGCTTCAGAGAGGTCCAGTCGTGCATCGCA 204373 |||||| ||||| | || | || || ||| |||| | |||||| || | Sbjct 1749 CTGTTGCGGACACCATGTTGCTTGATGTTGGCCTTGAGAGCGTCCCAGTCC--CAGAGGT 1806 Query 204374 CTG--GGTTTCACGCCCCACATGTCGAACTGAAAGATGCCTTGACTGACTGGGCTGCCCT 204431 ||| || || ||| ||||||||| |||| | ||||| || || || |||| Sbjct 1807 CTGAGGGCTTGACGTTCCACATGTCATACTGGAGAATGCCCTGTGAAACAGGAGATCCCT 1866 Query 204432 TGTACGTCGGATAAGGCTGATCCTCTTCTGCCAGCTTGCACGAGGCGGCCATGGCGTGAT 204491 ||| |||| || || | ||| |||||||||||||| ||||| | || || | Sbjct 1867 CGTATGTCGAGTATGGACCCTGCTCCTCTGCCAGCTTGCAAGAGGCAGTCAGAGCAGCGT 1926 Query 204492 AGTACATGGTCTCAAAGATCT 204512 ||| |||||||||||||||| Sbjct 1927 GGTAGATGGTCTCAAAGATCT 1947 Score = 113 bits (124), Expect = 7e-20 Identities = 439/678 (65%), Gaps = 28/678 (4%) Strand=Plus/Plus Query 204931 CTGCTGGTTAGACTTGCGGTTACAGGAGTCCTTGTACATCATGAACGGCATTCCGTTCTC 204990 || |||||| ||||||||| ||| |||||||||| ||||||||| | || |||| Sbjct 2285 CTTCTGGTTGCTCTTGCGGTTGCAGTGATCCTTGTACAGCATGAACGGGTTACCAGTCTC 2344 Query 204991 CATCTGAGATCGCAGAATGTGGGTCCACAATTCGCGAGCCTCCA----CTTGCTTCACGT 205046 |||||| ||| ||| | ||| | || | |||| | ||||| | | | Sbjct 2345 AGTCTGAGCCTCCAGGATGGAGTACCAAAGTTTCTGGGCCTTGATCGTCTTGCGACCCTT 2404 Query 205047 ACATCCCTTGAGACTCGTATTTTGTGTACAGCGCCACAAAGTCAGAACCGTACACGTCCA 205106 || ||| ||| || || ||||| ||| | || || |||||| |||| Sbjct 2405 ACCGGCCTG----CTCATACTTCTCATACAGAGCCTCGAACTCTTCACCGTAGCAGTCCG 2460 Query 205107 TCAGCCCTGGACATTTTTTGGGACACATCAGAGACCACATCTGATCGTCTTTC---ACCC 205163 || || || || | || || ||||||| | ||| | ||| |||| || | Sbjct 2461 CGAGGCCAGGGCACTCGTTCGGGCACATCAAGGTCCAG---TCGCCGTTTTTCTCAACGC 2517 Query 205164 TCTCCATAAACAGGTCGCTGATCCACAGGCCGTAAAACAGATCACGGGCCCTAATTCCGT 205223 || ||| ||||| || |||||| || || ||||| |||||||| | ||| | | Sbjct 2518 GCTTCATGAACAGATCAGGGATCCAAAGAGCGAGGAACAGGTCACGGGCACGAATCTCCT 2577 Query 205224 CGTCTCCAAGGTTCTTTTTCAAGTCCAGCCAAGCCGCA-ATGTCGGCGTGCCACGGCTCT 205282 | | ||| ||||||| | | ||| || || || | | || |||||||||||||| Sbjct 2578 CCTTTCCGTGGTTCTTCCTTAGGTCGAGG-AACTCGAAGACATCTGCGTGCCACGGCTCA 2636 Query 205283 AACCACACGGCCATTGCGCCTGGCCTCTTGTTCCCACCCTGGTCCACCATGCGAGTCATC 205342 | | | ||| | || || || | |||||| ||||||||||| || ||||| | Sbjct 2637 AGGTAGATGGCAAAGGCACCGGGGCGCTTGTTGCCACCCTGGTCGACGTAGCGAGCTGTG 2696 Query 205343 GCGTTGAAAACTCGCAGCATCGGCACCAGACCGTTGGCGGTCCCGTTCGTGCTGTTGATG 205402 |||||| || |||||||| || || | ||||| | ||| ||||| || | | ||| Sbjct 2697 TTGTTGAACACACGCAGCATGGGAACAATGCCGTTCGAGGTGCCGTTGGTACCGGCGATA 2756 Query 205403 GCCGAGCCTTCAGCCCTCACGTTGGAGATGGCCG----CGCCAATCCCGCCAGAACACTT 205458 |||| ||| |||| | ||||| || || || ||||||| ||| Sbjct 2757 TAGGAGC---CAG-TGGCACGGATGCGATGGACGTTGAGACCGATACCGCCAGCCATCTT 2812 Query 205459 GGCGATCTGGGCGC-ACTCTTGCAGAGTGCTGTAGATGCCTGCGATGGAATCGTCCGCCA 205517 || |||| ||| | | ||||| || ||| |||||| ||| | ||| |||||| || Sbjct 2813 GGAGATCATGGCACAAGTCTTG-AGGGTGTCGTAGATTCCTTCAATGCTGTCGTCCTTCA 2871 Query 205518 GTGTC-ACCAGATAGCACGAAGCCAGCTTGGCAAAGTTGGTGCCCGCGTGGAAGAGCGTG 205576 | || ||||| |||| || | || || || ||||| |||| ||| ||||| Sbjct 2872 -TATCAACCAGGAAGCATGACGACAACTGAGCCTGCGGTGTGCCGGCGTTGAAAAGCGTC 2930 Query 205577 GGGCTGGCGTGGCTGAAG 205594 ||| |||||| ||||| Sbjct 2931 GGGGAGGCGTGTGTGAAG 2948 >seq8624 Length=7849 Score = 141 bits (156), Expect = 1e-28 Identities = 332/498 (67%), Gaps = 11/498 (2%) Strand=Plus/Minus Query 159650 TTCTCGAAAAAGTTGGTCTTGCCCTCCATGGATATTGATTCCATGAACCCGAATGGGTTC 159709 |||||||| |||||||||||||| | | || || ||||| || |||||||||| Sbjct 7585 TTCTCGAAGAAGTTGGTCTTGCCGCCGAGTGAGATGTTCTCCATAAAATCGAATGGGTTG 7526 Query 159710 TTCACGTGATAGCGCTTCGGAAATCCGAGAGCCGCCAGCAACCTGTCTGCCACAAATTCG 159769 | | | ||| |||| ||| || || | || | ||||| || ||||| || Sbjct 7525 GTGGCACGGTAGACCTTCTCGTTTCCCAGGGCGACAAGAAGTCTGTCAGCGACAAACTCA 7466 Query 159770 ATGTAGCTACA-CATCTGCTCACAGTTGATCCCCAGCAGCCTAACGGGGAGCGCTTCCGA 159828 ||||| || | |||| | | ||| || ||||| || ||| | ||| |||| Sbjct 7465 ATGTA-CTGCTTCATCAGGTTGGCGTTCATGCCCAGGAGGGCGCAGGGCAACGCCTCCGT 7407 Query 159829 CAGAAACTCCTTCTCAATCTCGACCGCTTCGGTCACAATCTGCGAGACACGTTCGTACCC 159888 |||||||| | |||||||| ||| || ||| ||||||| | ||| || | Sbjct 7406 AAGAAACTCTTGCTCAATCTTGACAGCATCGACAACAATCTCCTTCACAACCTCCTTGTT 7347 Query 159889 CGGCTTGCCCAAAATGT---GGTCCTTAAACAGGAGGCACGCAAAGTCGCAGTGCAGTCC 159945 ||| || ||| || | |||||||| || ||||||||| ||| || || Sbjct 7346 GGGCCTGT------TGTTCAGGAGCGAGAACAGGAGACAGGCAAAGTCGGTGTGTAGACC 7293 Query 159946 CTCGTCCCGAGAGATGAACTCGTTGGACATGATGAGGCCCGGCATGATCCCACGCGGTTT 160005 ||| || || ||||||| ||||||||| | | || || ||||| | |||||| || Sbjct 7292 CTCATCACGCGAGATGAGCTCGTTGGAGAAAGTCAGACCAGGCATCAGGCCACGCTTCTT 7233 Query 160006 GAGCCAAAAAATGGCCGCAAAAGCACCGCTAAAAAAGATCCCCTCCACGGCCGCAAACGC 160065 |||||| || |||| |||||||||||||| || ||||| ||||| ||| | || || || Sbjct 7232 GAGCCAGAAGATGGAGGCAAAAGCACCGCTGAAGAAGATACCCTCGACGACAGCGAAAGC 7173 Query 160066 CACGAGCCTCTCACCAAAAGAGGCGTTGGTGTCATGGGTCCACCTTTTGGCCCATTCAGC 160125 | || | | |||| | | || |||| | ||||||| ||||| || || Sbjct 7172 GATCAGGCGCGTGGCAAAGGTTGACTTCTTGTCGGTGATCCACCTCAGAGCCCAGTCGGC 7113 Query 160126 CTTCTTTGCGATGCACGG 160143 |||||| |||||| || Sbjct 7112 CTTCTTGCGGATGCAGGG 7095 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795052913222960