Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Magnaporthe_20sp._20MG03_20[genbank_20GCA_5F001936055.1_202017-01-
05] 10,291 sequences; 41,129,187 total letters
Query= NC_026440.1
Length=2243109
Score E
Sequences producing significant alignments: (Bits) Value
seq8624 143 4e-28
seq9169 141 1e-27
seq9633 98.7 1e-14
>seq8624
Length=7849
Score = 143 bits (158), Expect = 4e-28
Identities = 228/322 (71%), Gaps = 4/322 (1%)
Strand=Plus/Plus
Query 1456460 GACTTTGCCTGTCTGCTCTACACGATGCTCGTCAACAAGCCGTCGACCGACGTGCCCAAG 1456519
|||||||||||||| || | | || | || ||||| ||| | || || |||
Sbjct 7305 GACTTTGCCTGTCTCCTGTTCTCGCTCCTGAACAACAGGCCCAACAAGGAGGTTGTGAAG 7364
Query 1456520 CAGATCATCGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCGCTGCCGGTG 1456579
|||| | ||||| || ||| |||| ||| |||||||| | | ||| || ||||
Sbjct 7365 GAGATTGTTGTCGATGCTGTCAAGATTGAGCAAGAGTTTCTTACGGAGGCGTTGCCCTGC 7424
Query 1456580 GCGCTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCCGACC 1456639
|| ||| | ||||||||||||| | || ||| ||||||||||| ||| ||||| |||
Sbjct 7425 GCCCTCCTGGGCATGAACGCCAAC-CTGATGAAGCAGTACATTGAGTTT-GTCGCTGACA 7482
Query 1456640 GCCTGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCGTTCCCATGG 1456699
| || || | || || || || ||||| |||||| | ||||||| ||| |
Sbjct 7483 GACTTCTTGTCGCCCTGGGAAACG-AGAAGGTCTACCGTGCCACCAACCCATTCGATTTT 7541
Query 1456700 ATGGAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCG-TGGCGAGTAC 1456758
|||||| ||||| |||| |||||||||||||| |||||| |||| ||||||||||
Sbjct 7542 ATGGAGAACATCTCACTCGGCGGCAAGACCAACTTCTTCGAGAAACGCGTTGGCGAGTAC 7601
Query 1456759 GCCAAGGCCGGCGTCACCGCCA 1456780
|| ||||| |||| ||||
Sbjct 7602 CAAAAAGCCGGTGTCATGGCCA 7623
Score = 111 bits (122), Expect = 2e-18
Identities = 135/183 (74%), Gaps = 1/183 (1%)
Strand=Plus/Plus
Query 1455885 TTCATCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCT 1455944
|||||| ||| |||| || || || |||||| ||||||||||| |||||||||
Sbjct 6802 TTCATCTCACACATCCTTGCATTCTT-CGCCGCTTCTGATGGCATCGTCAACGAGAACCT 6860
Query 1455945 GGCCGGCCGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCA 1456004
| | || || | || ||||| | || ||||| |||| || ||||| |||||
Sbjct 6861 CGTTGAGCGATTCAGCGCCGAAGTCCAGATTCCCGAGGCCCGTTGCTTCTACGGCTTCCA 6920
Query 1456005 GATCGCCATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAA 1456064
|||| || || ||||| ||||| || || |||||||||||||||||||| ||| ||||
Sbjct 6921 GATCATGATGGAGAACATTCACTCCGAGACTTACTCGCTCCTGATCGACACGTACATCAA 6980
Query 1456065 GGA 1456067
|||
Sbjct 6981 GGA 6983
Score = 93.3 bits (102), Expect = 6e-13
Identities = 117/157 (75%), Gaps = 9/157 (6%)
Strand=Plus/Plus
Query 1456123 AAAAAGGCCGACTGGGCGATGAAGTGGATCA---ACAAGGAGGGCCTCGACACTTTGCCG 1456179
|| |||||||||||||| ||| |||||||| ||||| || || || |||||||
Sbjct 7107 AAGAAGGCCGACTGGGCTCTGAGGTGGATCACCGACAAGAAG----TCAAC-CTTTGCCA 7161
Query 1456180 AGCGGCTCGTCGGCTTTGCCG-CGTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCGCCA 1456238
||| || ||| || || | ||||||||| ||||| ||| || ||| | |||
Sbjct 7162 CGCGCCTGATCGCTTTCGCTGTCGTCGAGGGTATCTTCTTCAGCGGTGCTTTTGCCTCCA 7221
Query 1456239 TCTTTTGGCTCAAGAAGCGCGGCCTCATGCCCGGTCT 1456275
|||| |||||||||||||| ||||| ||||| |||||
Sbjct 7222 TCTTCTGGCTCAAGAAGCGTGGCCTGATGCCTGGTCT 7258
>seq9169
Length=10546
Score = 141 bits (156), Expect = 1e-27
Identities = 186/258 (72%), Gaps = 0/258 (0%)
Strand=Plus/Minus
Query 259925 CCCACGCTCTTTAATGCCGGCACGCCGCGCCCGCAGAATTCGTCGTGCTTTCTGTTGGAC 259984
|| ||||| || || |||||||| |||| | ||| ||||| ||||| ||| | ||
Sbjct 2932 CCGACGCTTTTCAACGCCGGCACACCGCAGGCTCAGTTGTCGTCATGCTTCCTGGTTGAT 2873
Query 259985 ATGAAGGCCGATTCGATCGAGGGCATCTATGACACGCTCAAGCAGTGCGCGCTCATCTCC 260044
||||||| ||| || || || ||||| ||||| |||||| || || | ||||||
Sbjct 2872 ATGAAGGACGACAGCATTGAAGGAATCTACGACACCCTCAAGACTTGTGCCATGATCTCC 2813
Query 260045 AAGGCGGCCGGCGGCATCGGTTTTGCCGCACACAAGGTGCGCGCCGCGGGCGCCTACGTG 260104
||| ||| ||||| |||||| | || || | || ||| | ||| |||| |
Sbjct 2812 AAGATGGCTGGCGGTATCGGTCTCAACGTCCATCGCATCCGTGCCACTGGCTCCTATATC 2753
Query 260105 GCGGGCACCAACGGCCAGTCCAACGGCCTTGTGCCCATGCTTCGCGTTTTTAACGACACG 260164
|| || ||||||||| || |||||| |||| |||||||| || || || ||| ||||
Sbjct 2752 GCCGGTACCAACGGCACCTCGAACGGCATTGTTCCCATGCTGCGTGTGTTCAACAACACA 2693
Query 260165 GCGCGCTACGTCGACCAG 260182
|| |||||||||||||||
Sbjct 2692 GCTCGCTACGTCGACCAG 2675
>seq9633
Length=14596
Score = 98.7 bits (108), Expect = 1e-14
Identities = 80/97 (82%), Gaps = 0/97 (0%)
Strand=Plus/Plus
Query 165768 GGCGCCGTCGGTGCGCGCACCACCGAGAGCCAGGTGCACCGCGAGATGGCGTCGGCGCTG 165827
||||| |||||||| |||||||||||||||||| | ||||||||| |||| || | ||
Sbjct 12561 GGCGCAGTCGGTGCCCGCACCACCGAGAGCCAGCTTCACCGCGAGCTGGCCTCTGGCCTA 12620
Query 165828 CCGCTGCCCATTGGCTTCAAAAACAGCACCGACGGCA 165864
|| | ||| | |||||||| ||| ||||||||||||
Sbjct 12621 TCGTTCCCCGTCGGCTTCAAGAACGGCACCGACGGCA 12657
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7176818614135142
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |