Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Magnaporthe_20sp._20MG03_20[genbank_20GCA_5F001936055.1_202017-01-
05] 10,291 sequences; 41,129,187 total letters
Query= NC_029997.1
Length=105667
Score E
Sequences producing significant alignments: (Bits) Value
seq10044 104 2e-17
seq10256 84.2 1e-11
>seq10044
Length=21608
Score = 104 bits (114), Expect = 2e-17
Identities = 141/197 (72%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
||||| || ||||| || || || || || ||||| ||||| ||||||||||| || |
Sbjct 10815 ATGCAAATCTTCGTCAAGACGCTTACCGGCAAAACCATCACACTCGAAGTTGAATCTTCA 10756
Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730
||||| | || | | ||| ||| ||| ||||| || ||| | ||||| || |||
Sbjct 10755 GACACAATCGACAACGTCAAATCAAAGATTCAAGACAAGGAGGGTATCCCGCCTGACCAA 10696
Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790
|| || || || ||||| ||||| || ||||| || | ||| || | ||||||||
Sbjct 10695 CAACGCTTGATCTTTGCGGGCAAGCAGCTGGAGGATGGACGAACCCTGTCTGATTACAAT 10636
Query 23791 ATACAAAAAGAGTCCAC 23807
|| || || ||||| ||
Sbjct 10635 ATTCAGAAGGAGTCGAC 10619
>seq10256
Length=36607
Score = 84.2 bits (92), Expect = 1e-11
Identities = 136/193 (70%), Gaps = 2/193 (1%)
Strand=Plus/Plus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||| ||||| || ||||||||||| || || ||||| || || || || || |
Sbjct 12446 ATGCAGATCTTCGTCAAGACCCTCACGGGCAAGACTATCACCCTTGAGGTGGAGTCGAGC 12505
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
||||| | || ||| | || | || || ||||| || ||| | || || || ||
Sbjct 12506 GACACCATCGACAATGTCAAGTC-CAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCA 12564
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
||||| || || ||||||||||| || || || |||| | || | ||| |||||
Sbjct 12565 GCAGCGCTTGATCTTTGCCGGCAAGCAGCTTGAGGACGGCAGGACCCTCTCCGACTACAA 12624
Query 23790 CATACAAAAAGAG 23802
||| || || |||
Sbjct 12625 CATCCAGAAGGAG 12637
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 337967206307828
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |