Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20sp._20MG03_20[genbank_20GCA_5F001936055.1_202017-01- 05] 10,291 sequences; 41,129,187 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq10256 168 5e-37 seq10044 134 1e-26 seq9368 107 1e-18 >seq10256 Length=36607 Score = 168 bits (186), Expect = 5e-37 Identities = 180/234 (77%), Gaps = 8/234 (3%) Strand=Plus/Minus Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170 || || | ||| | || ||| ||||| || ||||||||||| ||||||||||| |||| | Sbjct 12672 CCACCACGCAGACGCAGCACGAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAG 12613 Query 44171 AGTTGGCGCT--CGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAG 44228 || || || |||| || |||||||| |||||||||||||| |||||||| || | | Sbjct 12612 AG--GGTCCTGCCGTCCTCAAGCTGCTTGCCGGCAAAGATCAAGCGCTGCTGGTCCGGGG 12555 Query 44229 GCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTC 44286 | | ||| ||||| ||| ||||| ||| || ||| | ||||||||| || || Sbjct 12554 GGATACCCTCCTTGTCCTGGATCTTGGACTTGACATTGT--CGATGGTGTCGCTCGACTC 12497 Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATGAT 44340 |||||| | || || ||||| |||||||||||||| |||||||| |||||||| Sbjct 12496 CACCTCAAGGGTGATAGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCATGAT 12443 >seq10044 Length=21608 Score = 134 bits (148), Expect = 1e-26 Identities = 158/212 (75%), Gaps = 4/212 (2%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 |||| || || ||||||||||||||||||||||| |||| || || |||| || Sbjct 11063 ACCAAATGGAGGGTGCTCTCCTTTTGGATGTTGTAGTCGGAAAGGGTCCGACCGTCCTCA 11122 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| || || || || | || || || || | ||| | ||| ||||| ||| Sbjct 11123 AGCTGCTTTCCAGCGAAAATAAGGCGTTGTTGGTCCGGAGGAATACCCTCCTTGTCCTGG 11182 Query 44249 ATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306 |||||| ||| || ||| | ||||| |||| ||| || ||||||| |||||||||| Sbjct 11183 ATCTTCGACTTTACATTGT--CGATGGTATCGGAGGACTCGACCTCCAAGGTAATCGTCT 11240 Query 44307 TTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 | || |||||||| || ||||| || |||||| Sbjct 11241 TGCCAGTGAGGGTTTTGACGAAAATCTGCATG 11272 Score = 113 bits (124), Expect = 3e-20 Identities = 168/236 (71%), Gaps = 2/236 (1%) Strand=Plus/Plus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || ||| || || | ||| | || |||| ||| || || ||||||||||||||||| Sbjct 10810 TTGCATACCACCACGCAGACGCAGGACCAAGTGCAGAGTAGATTCCTTTTGGATGTTGTA 10869 Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223 |||| || ||| | || |||| |||||| || || ||||||| ||||| || || Sbjct 10870 GTCGGACAGCGTGCGTCCATCCTCCAACTGCTTTCCAGCGAAGATCAGTCGCTGTTGGTC 10929 Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTT-CCTATGGTGTCGGCGG 44282 | ||| | ||| ||||| || ||||| | || || || | || ||||| | | Sbjct 10930 CGGAGGAATACCCTCCTTATCTTGGATCTT-GGATTTAACATTGTCAATCGTGTCTGAAG 10988 Query 44283 ATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 | || ||||||| ||| || ||||| ||||| | ||||| |||||||| |||||| Sbjct 10989 ACTCGACCTCCAACGTGATGGTCTTGCCCGTCAAAGTCTTGACGAAGATCTGCATG 11044 Score = 109 bits (120), Expect = 4e-19 Identities = 137/188 (73%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187 ||| |||||||| || |||||||| ||||||||||| |||| ||| || |||| || Sbjct 11290 CACGAGGTGAAGAGTACTCTCCTTCTGGATGTTGTAGTCGGAAAGTGTCCGACCGTCCTC 11349 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247 || ||||| |||||||| || | |||||| || || | ||| | ||| ||||| ||| Sbjct 11350 GAGTTGCTTGCCGGCAAAAATAAGACGCTGTTGGTCCGGAGGGATACCCTCCTTGTCCTG 11409 Query 44248 TATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307 |||||| ||| | | | ||||| ||| || |||||||| | || || ||||| Sbjct 11410 GATCTTCGACTTGACGTTGTCGATGGTATCGCTAGACTCCACCTCGAGGGTGATGGTCTT 11469 Query 44308 TCCCGTGA 44315 || |||| Sbjct 11470 GCCAGTGA 11477 Score = 95.1 bits (104), Expect = 9e-15 Identities = 149/211 (71%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187 ||| ||||| || || |||||| || || |||||||| | || || | || || Sbjct 10606 CACAAGGTGCAGAGTCGACTCCTTCTGAATATTGTAATCAGACAGGGTTCGTCCATCCTC 10665 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247 ||||||||| || ||||||||||| || || || || | || | ||| ||||| || Sbjct 10666 CAGCTGCTTGCCCGCAAAGATCAAGCGTTGTTGGTCAGGCGGGATACCCTCCTTGTCTTG 10725 Query 44248 TATCTTCTGCTTCAATGTT-CCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306 ||||| || || | ||| | || ||||| | ||||| || || | || || || | Sbjct 10726 AATCTT-TGATTTGACGTTGTCGATTGTGTCTGAAGATTCAACTTCGAGTGTGATGGTTT 10784 Query 44307 TTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 | || || || ||||| |||||||||||||| Sbjct 10785 TGCCGGTAAGCGTCTTGACGAAGATTTGCAT 10815 >seq9368 Length=12093 Score = 107 bits (118), Expect = 1e-18 Identities = 133/182 (73%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 44148 CCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGA 44207 |||| ||||||||||| |||| ||| || |||| ||||||||||| || ||||||| Sbjct 6228 CCTTCTGGATGTTGTAGTCGGAGAGAGTACGGCCGTCCTCCAGCTGCTTGCCAGCAAAGA 6287 Query 44208 TCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC 44267 | | |||||| || || | || | || ||||| ||| ||||| ||||| | Sbjct 6288 TAAGACGCTGTTGGTCAGGGGGAATTCCCTCCTTGTCCTGAATCTTGGACTTCACATTGT 6347 Query 44268 CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGA 44327 | || ||||| | ||| || ||||||| || || ||||| || || || |||||||||| Sbjct 6348 CGATCGTGTCCGAGGACTCGACCTCCAAGGTGATGGTCTTGCCAGTCAGAGTCTTCACGA 6407 Query 44328 AG 44329 || Sbjct 6408 AG 6409 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359945249441547