Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20sp._20MG05_20[genbank_20GCA_5F001936065.1_202017-01- 05] 8,530 sequences; 38,623,880 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq8475 170 4e-37 seq8409 145 2e-29 seq8321 134 3e-26 >seq8475 Length=35687 Score = 170 bits (188), Expect = 4e-37 Identities = 171/222 (77%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 |||||| | || |||||||| ||||| ||||| || || || || ||||| | ||||| Sbjct 24683 ACGAAGACGGAGCACAAGGTGCAGAGTCGACTCCTTCTGAATATTGTAATCAGACAGGGT 24742 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 | |||||| |||||||||||||| || ||||| | |||||||||||||| || | || Sbjct 24743 TCGTCCATCCTCCAGCTGCTTGCCCGCAAAGATCAAACGTTGTTGGTCAGGCGGGATACC 24802 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072 |||||||| || |||||| ||| ||||| ||||| ||||| || |||||| ||||| Sbjct 24803 CTCCTTGTCTTGAATCTTTGATTTGACGTTGTCGATTGTGTCTGAAGATTCAACTTCGAG 24862 Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| || || || || || ||||| || || | ||||| Sbjct 24863 TGTGATGGTTTTGCCGGTAAGCGTCTTGACGAAGATTTGCAT 24904 Score = 161 bits (178), Expect = 2e-34 Identities = 163/212 (77%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| | || || ||| ||| ||||||||||| || || | |||||||| || || Sbjct 25149 AGGACCAAATGGAGGGTGCTCTCCTTTTGGATGTTGTAGTCGGAAAGGGTCCGACCGTCC 25208 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || |||||||| || ||||| ||||||||||||||||| ||||||| || ||||||||| Sbjct 25209 TCAAGCTGCTTTCCAGCGAAAATAAGGCGTTGTTGGTCCGGAGGAATACCCTCCTTGTCC 25268 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || || || |||||||| || ||| || ||||| | || |||||| Sbjct 25269 TGGATCTTCGACTTTACATTGTCGATGGTATCGGAGGACTCGACCTCCAAGGTAATCGTC 25328 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || ||||| || || || || | |||||| Sbjct 25329 TTGCCAGTGAGGGTTTTGACGAAAATCTGCAT 25360 Score = 152 bits (168), Expect = 1e-31 Identities = 161/212 (76%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| | ||| ||||| || || ||||||||||| || || | || || | |||||| Sbjct 24921 AGGACCAAGTGCAGAGTAGATTCCTTTTGGATGTTGTAGTCGGACAGCGTGCGTCCATCC 24980 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 |||| |||||| || |||||||| || || |||||||| ||||||| || |||||||| Sbjct 24981 TCCAACTGCTTTCCAGCGAAGATCAGTCGCTGTTGGTCCGGAGGAATACCCTCCTTGTCT 25040 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| ||| || || || || ||||| || || ||||| | ||||| ||| Sbjct 25041 TGGATCTTGGATTTAACATTGTCAATCGTGTCTGAAGACTCGACCTCCAACGTGATGGTC 25100 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || ||||| | |||||| || || | |||||| Sbjct 25101 TTGCCCGTCAAAGTCTTGACGAAGATCTGCAT 25132 Score = 129 bits (142), Expect = 1e-24 Identities = 145/193 (75%), Gaps = 6/193 (3%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || ||||| ||||| ||| || |||||||| || || | ||| |||| || || Sbjct 25377 AGCACGAGGTGGAGAGTACTCTCCTTCTGGATGTTGTAGTCGGAAAGTGTCCGACCGTCC 25436 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || || |||||||| || || ||||| || |||||||| ||||| | || ||||||||| Sbjct 25437 TCGAGTTGCTTGCCGGCAAAAATAAGACGCTGTTGGTCCGGAGGGATACCCTCCTTGTCC 25496 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTC---AGAGCTTTCAACCTCGAGAGTGATC 211079 |||||||| || ||||| |||||||| || ||| || |||||||| ||||| Sbjct 25497 TGGATCTTCGACTTGACGTTGTCGATGGTATCGCTAGA---CTCCACCTCGAGGGTGATG 25553 Query 211080 GTCTTTCCCGTGA 211092 ||||| || |||| Sbjct 25554 GTCTTGCCAGTGA 25566 >seq8409 Length=28775 Score = 145 bits (160), Expect = 2e-29 Identities = 162/215 (75%), Gaps = 6/215 (3%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || ||||| || ||| ||| || |||||||| || || | |||||||| || || Sbjct 3727 AGCACGAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGACAGGGTCCTGCCGTCC 3786 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| || ||||| | ||| || ||||| || || | || ||||||||| Sbjct 3787 TCAAGCTGCTTGCCGGCAAAGATCAAGCGCTGCTGGTCCGGGGGGATACCCTCCTTGTCC 3846 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCT---TTCAACCTCGAGAGTGATC 211079 |||||||| || || || ||||||||||| ||| || ||||| || ||||| Sbjct 3847 TGGATCTTGGACTTGACATTGTCGATGGTGTC---GCTCGACTCCACCTCAAGGGTGATA 3903 Query 211080 GTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| |||||||| ||||| || || | |||||| Sbjct 3904 GTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 3938 >seq8321 Length=24316 Score = 134 bits (148), Expect = 3e-26 Identities = 137/179 (77%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 210927 TTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATA 210986 || |||||||| || || | || || | || || |||| ||||||||| || |||||| Sbjct 18434 TTCTGGATGTTGTAGTCGGAGAGAGTACGGCCGTCCTCCAACTGCTTGCCAGCAAAGATA 18493 Query 210987 AGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCG 211046 || || ||||||||||| |||| ||| ||||||||||| ||||| ||||| || ||| Sbjct 18494 AGACGCTGTTGGTCAGGGGGAATTCCCTCCTTGTCCTGAATCTTGGACTTCACATTGTCG 18553 Query 211047 ATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAA 211105 || ||||| ||| || ||||| | ||||| ||||| || || |||||||| || || Sbjct 18554 ATCGTGTCCGAGGACTCGACCTCCAAGGTGATGGTCTTGCCAGTCAGAGTCTTCACGAA 18612 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159025315553450