Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Magnaporthe_20sp._20MG07_20[genbank_20GCA_5F001936455.1_202017-01-
05] 14,029 sequences; 43,171,008 total letters
Query= NC_002331.1
Length=178733
Score E
Sequences producing significant alignments: (Bits) Value
seq13105 123 3e-23
seq13408 120 3e-22
>seq13105
Length=12360
Score = 123 bits (136), Expect = 3e-23
Identities = 147/194 (76%), Gaps = 4/194 (2%)
Strand=Plus/Plus
Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051
|||||| |||||||||||||||| ||| || || | || || |||||||| || || ||
Sbjct 11772 CTCCTTCTGAATATTGTAATCAGACAGGGTTCGTCCATCCTCCAGCTGCTTGCCCGCAAA 11831
Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCG 43110
|| | || || ||||| | ||| | | |||||||| | ||| | |||| ||||| ||
Sbjct 11832 GATCAAGCGTTGTTGGTCAGGCGGGATACCCTCCTTGT-CTTGAATCTTTGATTTGA-CG 11889
Query 43111 TCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTT 43169
| | | | ||||| ||||| || |||| |||||||||||||| || ||||||||
Sbjct 11890 TTGTCGATTGTGTCTGAAGATTCAACTTCGAGTGTGATGGTTTTGCCGGTAAGCGTCTTG 11949
Query 43170 ACAAAGATTTGCAT 43183
|| |||||||||||
Sbjct 11950 ACGAAGATTTGCAT 11963
Score = 91.5 bits (100), Expect = 2e-13
Identities = 95/125 (76%), Gaps = 0/125 (0%)
Strand=Plus/Plus
Query 42975 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 43034
|||||||| | |||||||||||||| || ||||| || | || ||||| |||| ||
Sbjct 12211 ACCAAATGGAGGGTGCTCTCCTTTTGGATGTTGTAGTCGGAAAGGGTCCGACCGTCCTCA 12270
Query 43035 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 43094
|||||||| |||||||| || || || || ||||| | || | | |||||||||| |
Sbjct 12271 AGCTGCTTTCCAGCGAAAATAAGGCGTTGTTGGTCCGGAGGAATACCCTCCTTGTCCTGG 12330
Query 43095 ATTTT 43099
|| ||
Sbjct 12331 ATCTT 12335
>seq13408
Length=15383
Score = 120 bits (132), Expect = 3e-22
Identities = 156/216 (72%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027
||||| ||| | || | ||||||||||| || || ||||| || | ||| |||| |
Sbjct 11712 ACGCAGCACGAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGACAGGGTCCTGCC 11653
Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087
||| || |||||||| || || || || | ||||||||||| | || | | ||||||
Sbjct 11652 GTCCTCAAGCTGCTTGCCGGCAAAGATCAAGCGCTGCTGGTCCGGGGGGATACCCTCCTT 11593
Query 43088 GTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGAT 43147
|||| ||| || |||| | | | ||||||||||| ||||| || | |||||
Sbjct 11592 GTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGCTCGACTCCACCTCAAGGGTGAT 11533
Query 43148 GGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183
|| |||||||| || ||||| || ||||| |||||
Sbjct 11532 AGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 11497
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 571717324636120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |