Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Magnaporthe_20sp._20MG07_20[genbank_20GCA_5F001936455.1_202017-01-
05] 14,029 sequences; 43,171,008 total letters
Query= NC_003529.1
Length=155060
Score E
Sequences producing significant alignments: (Bits) Value
seq12539 107 2e-18
>seq12539
Length=8783
Score = 107 bits (118), Expect = 2e-18
Identities = 340/515 (66%), Gaps = 23/515 (4%)
Strand=Plus/Minus
Query 52561 CGCAAAAAGGATGATTGGGCATTGAAATGGATCGAAAACGACAA--AGCCA-CTTTTGCC 52617
||||| |||| || ||||| ||| |||||| | |||||| || || | ||||||
Sbjct 1675 CGCAAGAAGGCCGACTGGGCTCTGAGGTGGATC---ACCGACAAGAAGTCAACCTTTGCC 1619
Query 52618 GAACGTCTGGTCGCGTTTGCTATAGTGGAAGGTGTGtttttttCGGGTAGTTTTGCGGCA 52677
|| ||| |||| || ||| | || || ||| | || || ||| |||||| |
Sbjct 1618 ACGCGCCTGATCGCTTTCGCTGTCGTCGAGGGTATCTTCTTCAGCGGTGCTTTTGCCTCC 1559
Query 52678 ATATTTTACATCAA-AACCTTGGGCATAATGCCCGGCCTCACGTTTAGCAACGAGTTGAT 52736
|| || | |||| || | ||| | | ||||| || || || || ||||||| | ||
Sbjct 1558 ATCTTCTGGCTCAAGAAGCGTGGCC-TGATGCCTGGTCTGACTTTCTCCAACGAGCTCAT 1500
Query 52737 ATCGCGCGACGAAGGAATGCACACAGATTTTGCGTGTTTG-TATTATAATACGCGCGTTA 52795
||||| || || || | ||||| || ||||| ||| | | || | ||| | |
Sbjct 1499 CTCGCGTGATGAGGGTCTACACACCGACTTTGCCTGTCTCCTGTTCT----CGCTCCT-- 1446
Query 52796 AAGAAAAATTGTCATATGAAAAAA-TTCTA---GACATGTTTAAAGAGGCCGTCGACATT 52851
||| || | | | || | || | || || || || || ||| | |||
Sbjct 1445 --GAACAACAGGCCCAACAAGGAGGTTGTGAAGGAGATTGTTGTCGATGCTGTCAAGATT 1388
Query 52852 GAAAAAGAGTTTTTTACGGACGCTTTACCCGTATCATTGTTGGGCATGAACGCGACCATG 52911
|| |||||||| ||||||| || || ||| | | ||||||||||||| | | ||
Sbjct 1387 GAGCAAGAGTTTCTTACGGAGGCGTTGCCCTGCGCCCTCCTGGGCATGAACGCCAACCTG 1328
Query 52912 ATGTGCGAGTACATCGAGTTTGTTGCGGACAGAC-TGTTGATGCAGCTCGGTCAGCCGAA 52970
||| ||||||| |||||||| || ||||||| | ||| || ||||| | |||
Sbjct 1327 ATGAAGCAGTACATTGAGTTTGTCGCTGACAGACTTCTTGTCGC-CCTCGGAAACGAGAA 1269
Query 52971 ATACTATAATGCGCGTAACCCCTTTTCGTTTATGAACAACATATCGCTCGAGGGCAAAAC 53030
||| ||| ||||| || |||||| | ||||| || |||| ||||| ||
Sbjct 1268 GGTCTACCGTGCCACCAACCCATTCGATTTTATGGAGAACATCTCACTCGGCGGCAAGAC 1209
Query 53031 AAACTTTTTCGAGAGACGTGTGGGCGAGTACAAAA 53065
||||| ||||||| ||| || ||||||||| |||
Sbjct 1208 CAACTTCTTCGAGAAACGCGTTGGCGAGTACCAAA 1174
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 495977008976800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |