Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20sp._20MG07_20[genbank_20GCA_5F001936455.1_202017-01- 05] 14,029 sequences; 43,171,008 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq13105 125 2e-23 seq13408 118 3e-21 seq11867 93.3 1e-13 >seq13105 Length=12360 Score = 125 bits (138), Expect = 2e-23 Identities = 143/192 (74%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||| |||||||| || ||||||| ||||||||||| || || || || ||||| ||||| Sbjct 12000 TTCCTTTTGGATGTTGTAGTCGGACAGCGTGCGTCCATCCTCCAACTGCTTTCCAGCGAA 12059 Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401 |||||| |||||||| || || || || || || ||||| || | ||| || || Sbjct 12060 GATCAGTCGCTGTTGGTCCGGAGGAATACCCTCCTTGTCTTGGATCTTGGATTTAACATT 12119 Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461 || || | || || || || || | |||||| ||||| || |||| ||||||||| Sbjct 12120 GTCAATCGTGTCTGAAGACTCGACCTCCAACGTGATGGTCTTGCCCGTCAAAGTCTTGAC 12179 Query 288462 GAATATCTGCAT 288473 ||| |||||||| Sbjct 12180 GAAGATCTGCAT 12191 Score = 93.3 bits (102), Expect = 1e-13 Identities = 135/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || || ||||| || || | || || ||||| || || | || || || || ||| Sbjct 11773 TCCTTCTGAATATTGTAATCAGACAGGGTTCGTCCATCCTCCAGCTGCTTGCCCGCAAAG 11832 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 |||| || ||||| | ||||| || || || || || || || | ||| ||||| Sbjct 11833 ATCAAGCGTTGTTGGTCAGGCGGGATACCCTCCTTGTCTTGAATCTTTGATTTGACGTTG 11892 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | || ||||| |||||||| ||||| || || ||||| || ||||||||| Sbjct 11893 TCGATTGTGTCTGAAGATTCAACTTCGAGTGTGATGGTTTTGCCGGTAAGCGTCTTGACG 11952 Query 288463 AATATCTGCAT 288473 || || ||||| Sbjct 11953 AAGATTTGCAT 11963 >seq13408 Length=15383 Score = 118 bits (130), Expect = 3e-21 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | || ||||| || | ||||| || || ||||| || ||||||| Sbjct 11723 CCACCACGCAGACGCAGCACGAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAC 11664 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || | ||||| || | || || || || ||||||| ||||| || ||| Sbjct 11663 AGGGTCCTGCCGTCCTCAAGCTGCTTGCCGGCAAAGATCAAGCGCTGCTGGTCCGGGGGG 11604 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || || |||||||| || | || || || || || | |||||||| || || Sbjct 11603 ATACCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGCTCGACTCCACC 11544 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATTAT 288476 || || ||||| ||||| || || || ||||||||||| |||||||| || Sbjct 11543 TCAAGGGTGATAGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCATGAT 11494 >seq11867 Length=6080 Score = 93.3 bits (102), Expect = 1e-13 Identities = 128/179 (72%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 288286 TTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATC 288345 || ||||| || ||||||| ||| || || ||||| || | || || || || ||||| Sbjct 5879 TTCTGGATGTTGTAGTCGGAGAGAGTACGGCCGTCCTCCAGCTGCTTGCCAGCAAAGATA 5820 Query 288346 AGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCT 288405 ||||||||||| | || ||||| || || ||||| || || | ||||| || || Sbjct 5819 AGACGCTGTTGGTCAGGGGGAATTCCCTCCTTGTCCTGAATCTTGGACTTCACATTGTCG 5760 Query 288406 ATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAA 288464 || | || || || || || | ||||| ||||| || ||||||||||| ||||| Sbjct 5759 ATCGTGTCCGAGGACTCGACCTCCAAGGTGATGGTCTTGCCAGTCAGAGTCTTCACGAA 5701 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179442361176662