Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Magnaporthe_20sp._20MG07_20[genbank_20GCA_5F001936455.1_202017-01-
05] 14,029 sequences; 43,171,008 total letters
Query= NC_011345.1
Length=155122
Score E
Sequences producing significant alignments: (Bits) Value
seq13105 104 2e-17
seq13408 100 3e-16
seq2039 89.7 5e-13
seq11867 86.0 6e-12
>seq13105
Length=12360
Score = 104 bits (114), Expect = 2e-17
Identities = 162/229 (71%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| || |||| ||||| || || || | | || |||||||| |||||||||||| |
Sbjct 11965 CCACCACGCAGACGCAGGACCAAGTGCAGAGTAGATTCCTTTTGGATGTTGTAGTCGGAC 12024
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| || || ||||| | || || || | |||| || |||||||||||||||||
Sbjct 12025 AGCGTGCGTCCATCCTCCAACTGCTTTCCAGCGAAGATCAGTCGCTGTTGGTCCGGAGGA 12084
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATTGTTCCACGGTGTCGGTCGACTCCAC 138566
||||| || ||||| ||| || ||| | |||| || | ||||| | ||||| ||
Sbjct 12085 ATACCCTCCTTGTCTTGGATCTTGGATTTAACATTG-TCAATCGTGTCTGAAGACTCGAC 12143
Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATG 138615
||| | ||| | || || || |||| ||| || || || |||||||||
Sbjct 12144 CTCCAACGTGATGGTCTTGCCCGTCAAAGTCTTGACGAAGATCTGCATG 12192
>seq13408
Length=15383
Score = 100 bits (110), Expect = 3e-16
Identities = 140/194 (72%), Gaps = 2/194 (1%)
Strand=Plus/Minus
Query 138423 CTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATA 138482
|||||| || |||||||||||| || || | |||||| || || || |||| | |
Sbjct 11688 CTCCTTCTGGATGTTGTAGTCGGACAGGGTCCTGCCGTCCTCAAGCTGCTTGCCGGCAAA 11629
Query 138483 GATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATT 138541
||| | ||||| |||||||| || ||||| || ||||| ||| || || | |||
Sbjct 11628 GATCAAGCGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTTGGACTTGACATT 11569
Query 138542 GTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTA 138601
|| | | ||||||| ||||||||||||| | || | || || || || || || || |
Sbjct 11568 GT-CGATGGTGTCGCTCGACTCCACCTCAAGGGTGATAGTCTTGCCCGTGAGGGTCTTGA 11510
Query 138602 CAAAAATCTGCATG 138615
| || |||||||||
Sbjct 11509 CGAAGATCTGCATG 11496
>seq2039
Length=254
Score = 89.7 bits (98), Expect = 5e-13
Identities = 79/99 (80%), Gaps = 0/99 (0%)
Strand=Plus/Plus
Query 138423 CTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATA 138482
|||||| || |||||||||||| | || || |||||||||||| || |||| | |
Sbjct 151 CTCCTTCTGGATGTTGTAGTCGGAAAGTGTCCGACCGTCCTCGAGTTGCTTGCCGGCAAA 210
Query 138483 GATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTC 138521
|| |||||||||||||||||||| ||||| || |||||
Sbjct 211 AATAAGACGCTGTTGGTCCGGAGGGATACCCTCCTTGTC 249
>seq11867
Length=6080
Score = 86.0 bits (94), Expect = 6e-12
Identities = 131/183 (72%), Gaps = 4/183 (2%)
Strand=Plus/Minus
Query 138425 CCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGA 138484
|||| || |||||||||||| | |||||| |||||| || || || || | | |||
Sbjct 5881 CCTTCTGGATGTTGTAGTCGGAGAGAGTACGGCCGTCCTCCAGCTGCTTGCCAGCAAAGA 5822
Query 138485 TTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTG--TTTTAATTG 138542
| |||||||||||||| || || || || || ||||| ||| | || | || ||||
Sbjct 5821 TAAGACGCTGTTGGTCAGGGGGAATTCCCTCCTTGTC-CTGAATCTTGGACTTCACATTG 5763
Query 138543 TTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTAC 138602
|| | ||||| | ||||| ||||| | || | || || ||||||||||| || ||
Sbjct 5762 -TCGATCGTGTCCGAGGACTCGACCTCCAAGGTGATGGTCTTGCCAGTCAGAGTCTTCAC 5704
Query 138603 AAA 138605
||
Sbjct 5703 GAA 5701
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496175374184880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |