Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Magnaporthe_20sp._20MG07_20[genbank_20GCA_5F001936455.1_202017-01-
05] 14,029 sequences; 43,171,008 total letters
Query= NC_011616.1
Length=148634
Score E
Sequences producing significant alignments: (Bits) Value
seq13105 114 1e-20
seq13408 84.2 2e-11
>seq13105
Length=12360
Score = 114 bits (126), Expect = 1e-20
Identities = 162/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946
||||| || | |||| ||||| || | ||||| || ||||| || ||||| ||| |
Sbjct 11965 CCACCACGCAGACGCAGGACCAAGTGCAGAGTAGATTCCTTTTGGATGTTGTAGTCGGAC 12024
Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006
| |||||| ||| || | ||| ||||||||| |||||| |||||| || || |||||
Sbjct 12025 AGCGTGCGTCCATCCTCCAACTGCTTTCCAGCGAAGATCAGTCGCTGTTGGTCCGGAGGA 12084
Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066
|| ||||||||||| ||| || || | | || | ||||| | | ||||||
Sbjct 12085 ATACCCTCCTTGTCTTGGATCTTGGATTTAACATTGTCAATCGTGTCTGAAGACTCGACC 12144
Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 127114
|| | || | || ||||| |||| ||| || || || |||||||||
Sbjct 12145 TCCAACGTGATGGTCTTGCCCGTCAAAGTCTTGACGAAGATCTGCATG 12192
Score = 93.3 bits (102), Expect = 4e-14
Identities = 143/199 (72%), Gaps = 4/199 (2%)
Strand=Plus/Plus
Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976
|| ||||| || |||||||||||||| || || || ||| || ||||| || ||
Sbjct 11767 GTCGACTCCTTCTGAATATTGTAATCAGACAGGGTTCGTCCATCCTCCAGCTGCTTGCCC 11826
Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTG-CTT 127035
|| ||||||| || || || || || || || |||||||||| | ||| | | || ||
Sbjct 11827 GCAAAGATCAAGCGTTGTTGGTCAGGCGGGATACCCTCCTTGT-CTTGAATCTTTGATTT 11885
Query 127036 GA-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAG 127094
|| |||| |||| ||||| | | || ||||||| || | ||||||||||| || |
Sbjct 11886 GACGTTG-TCGATTGTGTCTGAAGATTCAACTTCGAGTGTGATGGTTTTGCCGGTAAGCG 11944
Query 127095 TTTTTACAAAAATCTGCAT 127113
| || || || || |||||
Sbjct 11945 TCTTGACGAAGATTTGCAT 11963
>seq13408
Length=15383
Score = 84.2 bits (92), Expect = 2e-11
Identities = 112/156 (72%), Gaps = 0/156 (0%)
Strand=Plus/Minus
Query 126959 TCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTG 127018
|| || ||||| || || || ||||||| |||||||| || || || || |||||||||
Sbjct 11651 TCCTCAAGCTGCTTGCCGGCAAAGATCAAGCGCTGCTGGTCCGGGGGGATACCCTCCTTG 11592
Query 127019 TCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACC 127078
||| ||| || ||||| | |||| |||||| | ||| || || | ||| |
Sbjct 11591 TCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGCTCGACTCCACCTCAAGGGTGATA 11532
Query 127079 GTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 127114
|| ||||| || || || || || || |||||||||
Sbjct 11531 GTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCATG 11496
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 475417414990960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |