Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Magnaporthe_20sp._20MG07_20[genbank_20GCA_5F001936455.1_202017-01-
05] 14,029 sequences; 43,171,008 total letters
Query= NC_013953.1
Length=156344
Score E
Sequences producing significant alignments: (Bits) Value
seq13105 138 1e-27
seq12539 118 1e-21
seq13408 111 2e-19
seq11867 111 2e-19
>seq13105
Length=12360
Score = 138 bits (152), Expect = 1e-27
Identities = 169/228 (74%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| || || | |||||||| |||||||| | || |||||| | |
Sbjct 12191 ATGCAGATCTTCGTCAAGACTTTGACGGGCAAGACCATCACGTTGGAGGTCGAGTCTTCA 12132
Query 38304 GACA-GCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| | || || | ||||| || |||| ||||| ||||| ||||| | |||||
Sbjct 12131 GACACGATTGACAATG-TTAAATCCAAGATCCAAGACAAGGAGGGTATTCCTCCGGACCA 12073
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
|||||| || || | ||| || || ||| |||| || | ||||| || |||||||||
Sbjct 12072 ACAGCGACTGATCTTCGCTGGAAAGCAGTTGGAGGATGGACGCACGCTGTCCGACTACAA 12013
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470
||||||||||||| | || ||||| ||||| |||||| || | || ||
Sbjct 12012 CATCCAAAAGGAATCTACTCTGCACTTGGTCCTGCGTCTGCGTGGTGG 11965
Score = 114 bits (126), Expect = 1e-20
Identities = 167/231 (72%), Gaps = 4/231 (2%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
|||||||| ||||| || ||||| || |||||||||||||| |||| || || | |
Sbjct 11963 ATGCAAATCTTCGTCAAGACGCTTACCGGCAAAACCATCACACTCGAAGTTGAATCTTCA 11904
Query 38304 GACAGCGT-GCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCC-GACC 38361
|||| | | |||| | ||| ||| || | ||||| ||||| | ||||||| ||||
Sbjct 11903 GACACAATCGACAACG-TCAAATCAAAGATTCAAGACAAGGAGGGTA-TCCCGCCTGACC 11846
Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421
|||| || | || | |||||||| |||||||| || | || ||||| || ||||
Sbjct 11845 AACAACGCTTGATCTTTGCGGGCAAGCAGCTGGAGGATGGACGAACCCTGTCTGATTACA 11786
Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGCC 38472
| || || ||||| |||| ||||| | ||||| ||| | | |||||||
Sbjct 11785 ATATTCAGAAGGAGTCGACTCTGCACCTTGTGCTCCGTCTTCGTGGCGGCC 11735
Score = 102 bits (112), Expect = 8e-17
Identities = 104/133 (78%), Gaps = 2/133 (2%)
Strand=Plus/Minus
Query 38328 AAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAA 38387
|| |||| ||||| ||||| ||||| | |||||||| || || |||| ||| || ||
Sbjct 12335 AAGATCCAGGACAAGGAGGGTATTCCTCCGGACCAACAACGCCTTATTTTCGCTGGAAAG 12276
Query 38388 CAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGA-AGCGACGCTGCA 38446
||||| || |||| || ||||| ||||||||||||||||||||| ||| || || ||
Sbjct 12275 CAGCTTGAGGACGGTCGGACCCTTTCCGACTACAACATCCAAAAGGAGAGC-ACCCTCCA 12217
Query 38447 TTTGGTGCTGCGT 38459
|||||| || |||
Sbjct 12216 TTTGGTCCTTCGT 12204
>seq12539
Length=8783
Score = 118 bits (130), Expect = 1e-21
Identities = 199/285 (70%), Gaps = 5/285 (2%)
Strand=Plus/Plus
Query 133167 GTAGGTGTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAA 133226
||| |||||||| ||| ||| || | || ||||| | ||||||||| ||| || ||
Sbjct 1804 GTACGTGTCGATCAGGAGCGAGTAAGTCTCGGAGTGAATGTTCTCCATCATGATCTGGAA 1863
Query 133227 GCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGC-GAAACGCTCGACCAGAT 133285
|||||| ||||| || |||||| | ||| ||||| | || ||| ||||| || || |
Sbjct 1864 GCCGTAGAAGCAACGGGCCTCGGGAATCTGGACTTCG-GCGCTGAATCGCTCAACGAGGT 1922
Query 133286 TTTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGC 133345
| |||||||||||||| || |||||||| || || || | ||| |||||| |
Sbjct 1923 TCTCGTTGACGATGCCATCAGAAGCGGCGAAGAATGCAAGGATGTGTGAGATGAAGTACT 1982
Query 133346 GCTCGTTGTC---GTTCAAGCGCTCCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCT 133402
|| | || | | | | ||||||| | |||||||||| || | ||| |
Sbjct 1983 TTTCATCATCTGTGAGCTTGTTGTTCCAGTCGTGGAGATCCTTGGACAAATCAATCTCTT 2042
Query 133403 CGACGGTCCAAAACGACGCCTCGGCTTTTTTGTACATACTCCACA 133447
|| | ||||| || || |||||||| || |||||||| |||||
Sbjct 2043 CGGCCGTCCAGAATGAGGCCTCGGCCTTCTTGTACATCTGCCACA 2087
>seq13408
Length=15383
Score = 111 bits (122), Expect = 2e-19
Identities = 163/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| || || ||||||||||| || |||||| | || || ||| | | |
Sbjct 11497 ATGCAGATCTTCGTCAAGACCCTCACGGGCAAGACTATCACCCTTGAGGTGGAGTCGAGC 11556
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363
|||| | | | | | || || |||| ||||| ||||| || ||| | |||||
Sbjct 11557 GACACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCAG 11616
Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423
||||| | || | || ||||| ||||| || |||| | ||||| ||||||||||
Sbjct 11617 CAGCGCTTGATCTTTGCCGGCAAGCAGCTTGAGGACGGCAGGACCCTGTCCGACTACAAC 11676
Query 38424 ATCCAAAAGGA-AGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470
||||| ||||| ||| || || || | ||||||||| || | || ||
Sbjct 11677 ATCCAGAAGGAGAGC-ACCCTCCACCTCGTGCTGCGTCTGCGTGGTGG 11723
>seq11867
Length=6080
Score = 111 bits (122), Expect = 2e-19
Identities = 133/181 (73%), Gaps = 0/181 (0%)
Strand=Plus/Plus
Query 38253 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTG 38312
||||| || || || || ||||| ||||||||| | || |||||| || | |||| |
Sbjct 5701 TTCGTGAAGACTCTGACTGGCAAGACCATCACCTTGGAGGTCGAGTCCTCGGACACGATC 5760
Query 38313 CAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTC 38372
| | | || || || | ||||| |||||||||||| | ||||||||||| ||
Sbjct 5761 GACAATGTGAAGTCCAAGATTCAGGACAAGGAGGGAATTCCCCCTGACCAACAGCGTCTT 5820
Query 38373 ATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAG 38432
|| | || ||||| |||||||| |||| || || ||| ||||||||||||||| |||
Sbjct 5821 ATCTTTGCTGGCAAGCAGCTGGAGGACGGCCGTACTCTCTCCGACTACAACATCCAGAAG 5880
Query 38433 G 38433
|
Sbjct 5881 G 5881
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 500085088447360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |