Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20sp._20MG07_20[genbank_20GCA_5F001936455.1_202017-01- 05] 14,029 sequences; 43,171,008 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq13408 140 3e-28 seq13105 125 6e-24 seq11867 96.9 3e-15 >seq13408 Length=15383 Score = 140 bits (154), Expect = 3e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | | || ||| | || | || |||||||| || |||||||| |||| | Sbjct 11723 CCACCACGCAGACGCAGCACGAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAC 11664 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | ||| | |||| || |||||||| || ||||| ||||| ||||||||||||| || Sbjct 11663 AGGGTCCTGCCGTCCTCAAGCTGCTTGCCGGCAAAGATCAAGCGCTGCTGGTCCGGGGGG 11604 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | | |||||||||| |||||| ||| | | | | | ||||||||||| |||||| Sbjct 11603 ATACCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGCTCGACTCCACC 11544 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || | ||||| || || ||||| | || || || || |||||||| Sbjct 11543 TCAAGGGTGATAGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 11497 >seq13105 Length=12360 Score = 125 bits (138), Expect = 6e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | | || ||||| || | ||| |||||||| |||||||| |||| | Sbjct 11965 CCACCACGCAGACGCAGGACCAAGTGCAGAGTAGATTCCTTTTGGATGTTGTAGTCGGAC 12024 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | || || | || |||| |||||| || || || |||| ||||| ||||||| |||| Sbjct 12025 AGCGTGCGTCCATCCTCCAACTGCTTTCCAGCGAAGATCAGTCGCTGTTGGTCCGGAGGA 12084 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | | ||||||||| |||||| || | | | | | |||||| || || ||| Sbjct 12085 ATACCCTCCTTGTCTTGGATCTTGGATTTAACATTGTCAATCGTGTCTGAAGACTCGACC 12144 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 |||| |||||| || || ||||||||||| || || || |||||||| Sbjct 12145 TCCAACGTGATGGTCTTGCCCGTCAAAGTCTTGACGAAGATCTGCAT 12191 Score = 96.9 bits (106), Expect = 3e-15 Identities = 107/143 (75%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | | | |||||||| | || ||||||||||| |||||||| |||| Sbjct 12193 CCACCACGGAGACGAAGGACCAAATGGAGGGTGCTCTCCTTTTGGATGTTGTAGTCGGAA 12252 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | ||| || |||| || |||||||| || || || || | || || ||||||| |||| Sbjct 12253 AGGGTCCGACCGTCCTCAAGCTGCTTTCCAGCGAAAATAAGGCGTTGTTGGTCCGGAGGA 12312 Query 35630 ACGCTCTCCTTGTCCATGATCTT 35652 | | |||||||||| |||||| Sbjct 12313 ATACCCTCCTTGTCCTGGATCTT 12335 Score = 93.3 bits (102), Expect = 4e-14 Identities = 138/193 (72%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| ||||| |||||||| | || |||||| | || ||||||||||| |||||||| Sbjct 11772 CTCCTTCTGAATATTGTAATCAGACAGGGTTCGTCCATCCTCCAGCTGCTTGCCCGCAAA 11831 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 ||||| || || ||||| | || | | |||||||| | ||| |||| || || Sbjct 11832 GATCAAGCGTTGTTGGTCAGGCGGGATACCCTCCTTGT-CTTGAATCTTTGATTTGACGT 11890 Query 35665 TG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723 || | | ||||| ||||| || || | ||||| ||||| || || | || || | Sbjct 11891 TGTCGATTGTGTCTGAAGATTCAACTTCGAGTGTGATGGTTTTGCCGGTAAGCGTCTTGA 11950 Query 35724 CAAATATCTGCAT 35736 | || || ||||| Sbjct 11951 CGAAGATTTGCAT 11963 >seq11867 Length=6080 Score = 96.9 bits (106), Expect = 3e-15 Identities = 130/181 (72%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 35547 CCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATA 35606 |||| || |||||||| |||| | || || |||| ||||||||||| || ||||| | Sbjct 5881 CCTTCTGGATGTTGTAGTCGGAGAGAGTACGGCCGTCCTCCAGCTGCTTGCCAGCAAAGA 5822 Query 35607 TCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG 35666 | | ||||| ||||| | |||| | |||||||||| ||||| ||||| | | Sbjct 5821 TAAGACGCTGTTGGTCAGGGGGAATTCCCTCCTTGTCCTGAATCTTGGACTTCACATTGT 5762 Query 35667 CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAA 35726 | | |||||| || || ||||||| ||||| || || || |||| ||| ||||| | Sbjct 5761 CGATCGTGTCCGAGGACTCGACCTCCAAGGTGATGGTCTTGCCAGTCAGAGTCTTCACGA 5702 Query 35727 A 35727 | Sbjct 5701 A 5701 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450714547707320