Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Magnaporthe_20sp._20MG07_20[genbank_20GCA_5F001936455.1_202017-01-
05] 14,029 sequences; 43,171,008 total letters
Query= NC_027213.1
Length=214699
Score E
Sequences producing significant alignments: (Bits) Value
seq12556 145 1e-29
>seq12556
Length=8834
Score = 145 bits (160), Expect = 1e-29
Identities = 563/875 (64%), Gaps = 16/875 (2%)
Strand=Plus/Minus
Query 69352 ATAGTCCCCAGATTTTGCTGATTACTCTTTTTGTTACAGGCGTCCTTGTAAAGAATAAAC 69411
|| || || || || | ||| || ||||| ||| ||| |||||||| || || |||
Sbjct 6553 ATGGTACCAAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGATCCTTGTACAGCATGAAC 6494
Query 69412 GGAGTACCAGTTTCAATCTGAGATTCGATAATAGATTTCCAAACGACCCTAGCATTTATT 69471
|| ||||||| ||| |||||| || | || || | ||||| | || || ||
Sbjct 6493 GGGTTACCAGTCTCAGTCTGAGCCTCCAGGATGGAGTACCAAAGTTTCTGGGCCTTGATC 6434
Query 69472 ACGGTCTTGTAACGCTTCTCT---TTTTCATA-TTGTG-TATATAGCCGTTCGAATTCAT 69526
|||||| || ||| | | ||||| || | || | |||| ||||| || |
Sbjct 6433 ---GTCTTGCGACCCTTACCGGCCTGCTCATACTTCTCATACAGAGCC--TCGAACTCTT 6379
Query 69527 CTCCCCAAACATCATCCAATCCAGGACATTCATTTGGACACATCAATGACCACACATCAT 69586
| || | || | | ||||| || || || || |||||||| | ||| | | |
Sbjct 6378 CACCGTAGCAGTCCGCGAGGCCAGGGCACTCGTTCGGGCACATCAAGGTCCAGTCGCCGT 6319
Query 69587 CATCCTTAACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAGAGATCTCTGG 69646
| || ||| || ||||| || ||||| || ||||||||||| | || || || | ||
Sbjct 6318 TTTTCTCAACGCGCTTCATGAACAGATCAGGGATCCAAAGAGCGAGGAACAGGTCACGGG 6259
Query 69647 TTCTATTTTCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCATAATATCAGAAT 69706
| | | || || ||||| || || | || ||||| ||||| | | ||| | |
Sbjct 6258 CACGAATCTCCTCCTTTCCGTGGTTCTTCCTTAGGTCGAGGAACTCGAAGACATCTGCGT 6199
Query 69707 GCCATGGTTCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGATCTATGT 69766
|||| || || || || || || | | | || || || || || || ||||| || | ||
Sbjct 6198 GCCACGGCTCAAGGTAGATGGCAAAGGCACCGGGGCGCTTGTTGCCACCCTGGTCGACGT 6139
Query 69767 ATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGATTTACCATTTG 69826
| | || ||||| || | || | |||||| |||| ||| || || || | || || |
Sbjct 6138 AGCGAGCTGTGTTGTTGAACACACGCAGCATGGGAACAATGCCGTTCGAGGTGCCGTTGG 6079
Query 69827 TTCCAGAAATATAACTTCCTCTTGCGCGAATATTACTAATAGATAGACCTATTCCTCCTG 69886
| || | ||||| || | || || || | | ||||| || || || |
Sbjct 6078 TACCGGCGATATAGGAGCCAGTGGCACGGATGCGATGGACGTTGAGACCGATACCGCCAG 6019
Query 69887 CCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATATACCCTCTATGCTATCAT 69946
|||| || ||||| | |||||| || | |||||||| || ||||| ||||| || |
Sbjct 6018 CCATCTTGGAGATCATGGCACAAGTCTTGAGGGTGTCATAGATTCCCTCAATGCTGTCGT 5959
Query 69947 CTATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGTATAGTTCCCGCATTAAATA 70006
| |||| | || || || || |||| ||| || || || || || || |
Sbjct 5958 CCTTCATATCAACCAGGAAGCATGACGACAACTGAGCCTGCGGTGTGCCGGCGTTGAAAA 5899
Query 70007 ATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTGTATGTTTCAATAGCTG 70066
|| || || ||||| ||||| |||| ||| | || ||||| ||||| || ||
Sbjct 5898 GCGTCGGGGAGGCGTGTGTGAAGAATTTGCTAGACATAAGGTTGTAGGTTTCGATGACTC 5839
Query 70067 ATTCTAT-ATCCCACTGATGAATTCCTATCGCGACACGCATCAACATATGCTGAGGTCGT 70125
|| || | ||| | || |||| || |||||||| | ||| ||||| || |
Sbjct 5838 GCTCAATGTTGTCACCCCAG-ATACCTACAGCAACACGCATGATCATGTGCTGTGGCCTC 5780
Query 70126 TCTACCGTTTTATTATTTATTTTCAACAGGTATGATTTTTCCAGAGTTTTAAACCCAAAA 70185
|| || | || ||| | ||||| ||||| || | || ||||| || || || |||
Sbjct 5779 TCGACAATCTTGCCATTGAGCTTCAATAGGTAAGACCTCTCGAGAGTCTTGAAGCCGAAA 5720
Query 70186 TAGTTGTA--TGAAAAGTCTCTTTCGTAAATAATA 70218
|| | ||| ||||| || | ||||| | ||||
Sbjct 5719 TATTGGTAGTTGAAA--TCACGGTCGTAGACAATA 5687
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 686788341955560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |