Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20sp._20MG07_20[genbank_20GCA_5F001936455.1_202017-01- 05] 14,029 sequences; 43,171,008 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq13105 113 3e-20 seq2039 109 3e-19 seq13408 105 4e-18 >seq13105 Length=12360 Score = 113 bits (124), Expect = 3e-20 Identities = 164/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538 |||||| | |||||| | ||| | || ||||| |||||| ||||| || ||||| || Sbjct 11736 GCCGCCACGAAGACGGAGCACAAGGTGCAGAGTCGACTCCTTCTGAATATTGTAATCAGA 11795 Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598 || ||||| | || || || || || || ||||| || || || |||||||| ||||| Sbjct 11796 CAGGGTTCGTCCATCCTCCAGCTGCTTGCCCGCAAAGATCAAGCGTTGTTGGTCAGGCGG 11855 Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCA 34657 | |||||||||||| ||| |||| ||| ||| | ||||||||| || | Sbjct 11856 GATACCCTCCTTGTCT-TGAATCTTTGATTTGACGTTGTCGATTGTGTCTGAAGATTCAA 11914 Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 |||| | || || ||||| ||||| | ||| || || || || ||||| Sbjct 11915 CTTCGAGTGTGATGGTTTTGCCGGTAAGCGTCTTGACGAAGATTTGCAT 11963 Score = 107 bits (118), Expect = 1e-18 Identities = 104/134 (78%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 ||||| | ||||||||||| |||||||||||||| ||||| || || ||||| || || Sbjct 12202 AGACGAAGGACCAAATGGAGGGTGCTCTCCTTTTGGATGTTGTAGTCGGAAAGGGTCCGA 12261 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 |||| ||||| || || || || || || | || ||||||||||| || | |||||| Sbjct 12262 CCGTCCTCAAGCTGCTTTCCAGCGAAAATAAGGCGTTGTTGGTCCGGAGGAATACCCTCC 12321 Query 34609 TTGTCTGTGATCTT 34622 ||||| |||||| Sbjct 12322 TTGTCCTGGATCTT 12335 Score = 96.9 bits (106), Expect = 2e-15 Identities = 155/220 (70%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 ||||||| ||||| || ||||| |||||||| ||||| || || || || || || Sbjct 11974 AGACGCAGGACCAAGTGCAGAGTAGATTCCTTTTGGATGTTGTAGTCGGACAGCGTGCGT 12033 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 | || || | || || || || || || | |||||||||||||| || | |||||| Sbjct 12034 CCATCCTCCAACTGCTTTCCAGCGAAGATCAGTCGCTGTTGGTCCGGAGGAATACCCTCC 12093 Query 34609 TTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667 |||||| |||| || | |||||| | ||| |||||| ||| || |||| || Sbjct 12094 TTGTCTTGGATC-TTGGATTTAACATTGTCAATCGTGTCTGAAGACTCGACCTCCAACGT 12152 Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707 || || || || || || || || || || ||||||||| Sbjct 12153 GATGGTCTTGCCCGTCAAAGTCTTGACGAAGATCTGCATG 12192 >seq2039 Length=254 Score = 109 bits (120), Expect = 3e-19 Identities = 90/110 (82%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 34504 TGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGT 34563 |||||||| |||||||| || ||||| || || |||||||| || |||| || ||||| Sbjct 140 TGGAGAGTACTCTCCTTCTGGATGTTGTAGTCGGAAAGTGTCCGACCGTCCTCGAGTTGC 199 Query 34564 TTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTC 34613 || |||||||| || | ||||||||||||||| || | ||||||||||| Sbjct 200 TTGCCGGCAAAAATAAGACGCTGTTGGTCCGGAGGGATACCCTCCTTGTC 249 >seq13408 Length=15383 Score = 105 bits (116), Expect = 4e-18 Identities = 159/221 (72%), Gaps = 4/221 (2%) Strand=Plus/Minus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 ||||||| ||| | ||||| ||||||||||| || ||||| || || || || || | Sbjct 11714 AGACGCAGCACGAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGACAGGGTCCTG 11655 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 |||| ||||| || || |||||||| || || ||||| |||||||| || | |||||| Sbjct 11654 CCGTCCTCAAGCTGCTTGCCGGCAAAGATCAAGCGCTGCTGGTCCGGGGGGATACCCTCC 11595 Query 34609 TTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTC-TTCGCTCTCCACTTCCACGG 34666 ||||| |||| || | || || | || ||||| ||| |||||| || | || Sbjct 11594 TTGTCCTGGATC-TTGGACTTGACATTGTCGATGGTGTCGCTCG-ACTCCACCTCAAGGG 11537 Query 34667 TTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707 | || || || || || | || || || || ||||||||| Sbjct 11536 TGATAGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCATG 11496 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314675788024757