Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20sp._20MG07_20[genbank_20GCA_5F001936455.1_202017-01- 05] 14,029 sequences; 43,171,008 total letters Query= NC_029304.1 Length=111246 Score E Sequences producing significant alignments: (Bits) Value seq13105 86.0 4e-12 >seq13105 Length=12360 Score = 86.0 bits (94), Expect = 4e-12 Identities = 100/135 (74%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 27883 GACAAAGAAGGTGTTCCGATGGAGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGAC 27942 ||||| || ||| |||| ||| || ||||| | ||||| || ||||| || | || Sbjct 12326 GACAAGGAGGGTATTCCTCCGGACCAACAACGCCTTATTTTCGCTGGAAAGCAGCTTGAG 12267 Query 27943 GACGAACGCAGCTTGTCCGATTACAACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTG 28002 |||| || | | | ||||| |||||||||||||| |||||||| | |||||||| | Sbjct 12266 GACGGTCGGACCCTTTCCGACTACAACATCCAAAAGGAGAGCACCCTCCATTTGGTCCTT 12207 Query 28003 CGTTTGCGTGGCGGC 28017 ||| | ||||| ||| Sbjct 12206 CGTCTCCGTGGTGGC 12192 Score = 84.2 bits (92), Expect = 2e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 27883 GACAAAGAAGGTGTTCCGATGGAGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGAC 27942 ||||| || ||| |||| ||| || || || | || || || ||||| || ||||| Sbjct 12098 GACAAGGAGGGTATTCCTCCGGACCAACAGCGACTGATCTTCGCTGGAAAGCAGTTGGAG 12039 Query 27943 GACGAACGCAGCTTGTCCGATTACAACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTG 28002 || | ||||| ||||||| |||||||||||||| || ||| |||| ||||| || Sbjct 12038 GATGGACGCACGCTGTCCGACTACAACATCCAAAAGGAATCTACTCTGCACTTGGTCCTG 11979 Query 28003 CGTTTGCGTGGCGG 28016 ||| ||||||| || Sbjct 11978 CGTCTGCGTGGTGG 11965 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 355801555202883