Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20sp._20MG07_20[genbank_20GCA_5F001936455.1_202017-01- 05] 14,029 sequences; 43,171,008 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq12556 163 4e-35 seq12539 87.8 2e-12 >seq12556 Length=8834 Score = 163 bits (180), Expect = 4e-35 Identities = 445/680 (65%), Gaps = 16/680 (2%) Strand=Plus/Minus Query 77955 CCAGGGCATTCATTTGGGCACATCAATGACCAGTCACCATCTTCCTTAACTCGTTTCATA 78014 |||||||| || || ||||||||||| | |||||| || | || || ||| || ||||| Sbjct 6358 CCAGGGCACTCGTTCGGGCACATCAAGGTCCAGTCGCCGTTTTTCTCAACGCGCTTCATG 6299 Query 78015 AAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATTTCCT 78074 || |||||||| ||||| ||||| | || || || |||| | | || || ||||| Sbjct 6298 AACAGATCAGGGATCCAAAGAGCGAGGAACAGGTCACGGGCACGAATCTCCTCCTTTCCG 6239 Query 78075 GTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATT 78134 ||||| | || ||||| ||||| | | ||| | ||||| || || || || || Sbjct 6238 TGGTTCTTCCTTAGGTCGAGGAACTCGAAGACATCTGCGTGCCACGGCTCAAGGTAGATG 6179 Query 78135 GCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTATAA 78194 || | | || || || || || || ||||| || | || | || ||||| || | Sbjct 6178 GCAAAGGCACCGGGGCGCTTGTTGCCACCCTGGTCGACGTAGCGAGCTGTGTTGTTGAAC 6119 Query 78195 ACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACTTCCA 78254 || | || ||| |||| ||| ||||| || || || || || || | ||||| ||| Sbjct 6118 ACACGCAGCATGGGAACAATGCCGTTCGAGGTGCCGTTGGTACCGGCGATATAGGAGCCA 6059 Query 78255 CTTGCGCGAATATTACTAATGGATATCCCTATTCCTCCTGCCATCTTAGATATTAGAGCG 78314 | || || || | | | | || || || || |||||||| || || | || Sbjct 6058 GTGGCACGGATGCGATGGACGTTGAGACCGATACCGCCAGCCATCTTGGAGATCATGGCA 5999 Query 78315 CAACGTTTCAATGTATCGTAGATACCCTCTATACTGTCATCCATCATGTTAAGAAGAAAA 78374 ||| || | || || ||||| ||||| || ||||| ||| |||| | || || || Sbjct 5998 CAAGTCTTGAGGGTGTCATAGATTCCCTCAATGCTGTCGTCCTTCATATCAACCAGGAAG 5939 Query 78375 CAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAATAATGTCGGAGATGCATGCGTA 78434 || |||| ||| || || || || || || | ||||| || || || || Sbjct 5938 CATGACGACAACTGAGCCTGCGGTGTGCCGGCGTTGAAAAGCGTCGGGGAGGCGTGTGTG 5879 Query 78435 AACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAGCTGATTCTATGT------CCCAT 78488 || |||| ||| | || ||||| ||||| || || || |||| |||| Sbjct 5878 AAGAATTTGCTAGACATAAGGTTGTAGGTTTCGATGACTCGCTCAATGTTGTCACCCCA- 5820 Query 78489 TGATGAATTCCTACCGCTACACGCATCAACATATGCTGAGGTCTTTCAACCGTCTTATTA 78548 || ||||| || |||||||| | ||| ||||| || || || || |||| | Sbjct 5819 -----GATACCTACAGCAACACGCATGATCATGTGCTGTGGCCTCTCGACAATCTTGCCA 5765 Query 78549 TTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAA 78606 || | ||||| | ||| || | || | ||| || || || ||||| | ||| ||||| Sbjct 5764 TTGAGCTTCAATAGGTAAGACCTCTCGAGAGTCTTGAAGCCGAAATATTGGTAGTTGAAA 5705 Query 78607 AGTCTCTCTCGTAAATAATA 78626 || | ||||| | |||| Sbjct 5704 --TCACGGTCGTAGACAATA 5687 >seq12539 Length=8783 Score = 87.8 bits (96), Expect = 2e-12 Identities = 172/254 (68%), Gaps = 3/254 (1%) Strand=Plus/Plus Query 48438 TCGGAGTGAATATTTTCAATTGCCATCTGAAATCCGTAAAAACATCTCGCTTCTGTGATC 48497 ||||||||||| || || || ||||| || ||||| || || | || || | ||| Sbjct 1832 TCGGAGTGAATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCAACGGGCCTCGGGAATC 1891 Query 48498 TGTACCTCCGTACAAAATCGTTCAGCCAAATTCTCATTTACTATTCCATCACTAGCAGCA 48557 || || || | | ||||| ||| | | ||||| || || || |||||| ||| || Sbjct 1892 TGGACTTCGGCGCTGAATCGCTCAACGAGGTTCTCGTTGACGATGCCATCAGAAGCGGCG 1951 Query 48558 AAAAATGCTAATACATGTTTAATAAAATATTTTTCGTTGGAAGTCAG---TTTATTCCAG 48614 || ||||| | | ||| || || || ||||| | || || || |||||| Sbjct 1952 AAGAATGCAAGGATGTGTGAGATGAAGTACTTTTCATCATCTGTGAGCTTGTTGTTCCAG 2011 Query 48615 TCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAATGATGCCTCTGCTTTT 48674 || | || ||| || || | ||| | ||||| || ||||| ||||| ||||| || || Sbjct 2012 TCGTGGAGATCCTTGGACAAATCAATCTCTTCGGCCGTCCAGAATGAGGCCTCGGCCTTC 2071 Query 48675 TTATACATATTCCA 48688 || ||||| | ||| Sbjct 2072 TTGTACATCTGCCA 2085 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694546981142560