Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20sp._20MG07_20[genbank_20GCA_5F001936455.1_202017-01- 05] 14,029 sequences; 43,171,008 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq12556 172 8e-38 seq12539 96.9 5e-15 >seq12556 Length=8834 Score = 172 bits (190), Expect = 8e-38 Identities = 447/680 (66%), Gaps = 16/680 (2%) Strand=Plus/Minus Query 76550 CCAGGACATTCATTCGGACACATCAATGACCACTCACCATCTTCCTTAACCCGTTTCATA 76609 ||||| || || ||||| |||||||| | ||| || || | || || ||| || ||||| Sbjct 6358 CCAGGGCACTCGTTCGGGCACATCAAGGTCCAGTCGCCGTTTTTCTCAACGCGCTTCATG 6299 Query 76610 AAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTCATTTCCT 76669 || |||||||| ||||| ||||| | || || || |||| | | || || ||||| Sbjct 6298 AACAGATCAGGGATCCAAAGAGCGAGGAACAGGTCACGGGCACGAATCTCCTCCTTTCCG 6239 Query 76670 GTATTCTTTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGATATATC 76729 ||||| | || || |||||||| | | ||| | ||||| || || || || || Sbjct 6238 TGGTTCTTCCTTAGGTCGAGGAACTCGAAGACATCTGCGTGCCACGGCTCAAGGTAGATG 6179 Query 76730 GCCATAACACCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTATTATAA 76789 || | |||| || || || || || ||||| || | || | || ||||| || | Sbjct 6178 GCAAAGGCACCGGGGCGCTTGTTGCCACCCTGGTCGACGTAGCGAGCTGTGTTGTTGAAC 6119 Query 76790 ACTCTCAACATTGGAATAATGCCGTTAGATGTACCATTTGTTCCAGAAATATAACTTCCA 76849 || | || ||| |||| ||||||||| || || || || || || | ||||| ||| Sbjct 6118 ACACGCAGCATGGGAACAATGCCGTTCGAGGTGCCGTTGGTACCGGCGATATAGGAGCCA 6059 Query 76850 CATGCACGAATATTACTAATAGATAGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGCA 76909 ||||| || | | || || || || || ||||| || ||||| | ||| Sbjct 6058 GTGGCACGGATGCGATGGACGTTGAGACCGATACCGCCAGCCATCTTGGAGATCATGGCA 5999 Query 76910 CAGCGTTTCAATGTGTCATAGATGCCCTCTATACTATCATCCATCATGTTAAGAAGAAAA 76969 || || | ||||||||||| ||||| || || || ||| |||| | || || || Sbjct 5998 CAAGTCTTGAGGGTGTCATAGATTCCCTCAATGCTGTCGTCCTTCATATCAACCAGGAAG 5939 Query 76970 CAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAACAATGTAGGAGATGCATGAGTG 77029 || |||| ||| || || || || || || | || || || || || ||| Sbjct 5938 CATGACGACAACTGAGCCTGCGGTGTGCCGGCGTTGAAAAGCGTCGGGGAGGCGTGTGTG 5879 Query 77030 AACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAACTGCTTCTAT------ATCCCAT 77083 || |||| ||| | || ||||| ||||| || ||| || || | |||| Sbjct 5878 AAGAATTTGCTAGACATAAGGTTGTAGGTTTCGATGACTCGCTCAATGTTGTCACCCCA- 5820 Query 77084 TGATGAATTCCTACAGCGACACGCATCAACATATGCTGAGGTCGTTCTACAGTCTTATTA 77143 || |||||||| |||||||| | ||| ||||| || | || ||| |||| | Sbjct 5819 -----GATACCTACAGCAACACGCATGATCATGTGCTGTGGCCTCTCGACAATCTTGCCA 5765 Query 77144 TTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAA 77201 || | ||||| | ||| || | || | ||| || || || ||||| | ||| ||||| Sbjct 5764 TTGAGCTTCAATAGGTAAGACCTCTCGAGAGTCTTGAAGCCGAAATATTGGTAGTTGAAA 5705 Query 77202 AGTCTCTTTCGTAAATAATA 77221 || | ||||| | |||| Sbjct 5704 --TCACGGTCGTAGACAATA 5687 >seq12539 Length=8783 Score = 96.9 bits (106), Expect = 5e-15 Identities = 174/254 (69%), Gaps = 3/254 (1%) Strand=Plus/Plus Query 46927 TCTGAATGAATGTTTTCAATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATC 46986 || || |||||||| || || ||||| || ||||| || || | || || | |||| Sbjct 1832 TCGGAGTGAATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCAACGGGCCTCGGGAATC 1891 Query 46987 TGTACCTCTGTACAAAATCGTTCAGACAAATTCTCATTCACTATTCCATCACTAGCAGCA 47046 || || || | | ||||| ||| | ||||| || || || |||||| ||| || Sbjct 1892 TGGACTTCGGCGCTGAATCGCTCAACGAGGTTCTCGTTGACGATGCCATCAGAAGCGGCG 1951 Query 47047 AAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGTAGTCAGTTTATT---CCAG 47103 || ||||| | | ||| || || || |||||||| || || || || |||| Sbjct 1952 AAGAATGCAAGGATGTGTGAGATGAAGTACTTTTCATCATCTGTGAGCTTGTTGTTCCAG 2011 Query 47104 TCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAGAATGACGCCTCTGCTTTT 47163 || | || ||| || || | ||| | ||||| || ||||||||||| ||||| || || Sbjct 2012 TCGTGGAGATCCTTGGACAAATCAATCTCTTCGGCCGTCCAGAATGAGGCCTCGGCCTTC 2071 Query 47164 TTATACATATTCCA 47177 || ||||| | ||| Sbjct 2072 TTGTACATCTGCCA 2085 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712809378041280