Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20sp._20MG07_20[genbank_20GCA_5F001936455.1_202017-01- 05] 14,029 sequences; 43,171,008 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq13105 132 1e-25 seq13408 129 1e-24 seq11867 120 7e-22 seq2039 84.2 5e-11 >seq13105 Length=12360 Score = 132 bits (146), Expect = 1e-25 Identities = 153/205 (75%), Gaps = 1/205 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || ||| | || || || || ||||| | ||||| || |||||| Sbjct 12188 CAGATCTTCGTCAAGACTTTGACGGGCAAGACCATCACGTTGGAGGTCGAGTCTTCAGAC 12129 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || || ||| ||||| || ||||| || || || ||||||||||| || Sbjct 12128 ACGATTGACAATGTTAAATCCAAGATCCAAGACAAGGAGGGTATTCCTCCGGACCAACAG 12069 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 ||||| |||||||| ||||| ||| | || |||||| | || || |||| || ||| || Sbjct 12068 CGACTGATCTTCGCTGGAAAGCAGTTGGAGGATGGACGCACGCTGTCCGACTACAACATC 12009 Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128 ||||| ||||| || ||||| |||| Sbjct 12008 CAAAAGGAATCTACTCTGCA-CTTG 11985 Score = 114 bits (126), Expect = 3e-20 Identities = 104/131 (79%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 177981 GACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAG 178040 || |||||||| |||||||| ||||| |||||||| || || || ||||||||||| Sbjct 12359 GATACCATCGACAACGTCAAGTCGAAGATCCAGGACAAGGAGGGTATTCCTCCGGACCAA 12300 Query 178041 CAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAAC 178100 ||||| ||||| ||||| ||||| ||||| || || || |||| ||| |||| || ||| Sbjct 12299 CAACGCCTTATTTTCGCTGGAAAGCAGCTTGAGGACGGTCGGACCCTTTCCGACTACAAC 12240 Query 178101 GTCCAAAAAGA 178111 ||||||| || Sbjct 12239 ATCCAAAAGGA 12229 >seq13408 Length=15383 Score = 129 bits (142), Expect = 1e-24 Identities = 144/191 (75%), Gaps = 6/191 (3%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA---AGCTCA 177980 || || ||||| || || ||||| || || || |||||||| |||||||| ||| Sbjct 11500 CAGATCTTCGTCAAGACCCTCACGGGCAAGACTATCACCCTTGAGGTGGAGTCGAGC--- 11556 Query 177981 GACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAG 178040 ||||||||||| || ||||| ||||| |||||||| || || ||||| ||||||||| Sbjct 11557 GACACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCAG 11616 Query 178041 CAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAAC 178100 || || | ||||| ||||| || ||||| || || || ||||| || |||| || ||| Sbjct 11617 CAGCGCTTGATCTTTGCCGGCAAGCAGCTTGAGGACGGCAGGACCCTGTCCGACTACAAC 11676 Query 178101 GTCCAAAAAGA 178111 |||| || || Sbjct 11677 ATCCAGAAGGA 11687 >seq11867 Length=6080 Score = 120 bits (132), Expect = 7e-22 Identities = 134/179 (75%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 177930 TTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATC 177989 |||||||| ||||| || || || || |||||| | ||||| || ||| ||||| ||| Sbjct 5701 TTCGTGAAGACTCTGACTGGCAAGACCATCACCTTGGAGGTCGAGTCCTCGGACACGATC 5760 Query 177990 GAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTT 178049 || || || || |||||||||||||| || ||||| || || ||||| || || ||| Sbjct 5761 GACAATGTGAAGTCCAAGATTCAGGACAAGGAGGGAATTCCCCCTGACCAACAGCGTCTT 5820 Query 178050 ATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAA 178108 ||||| || || || ||||| || || || | ||||| |||| || ||| |||| || Sbjct 5821 ATCTTTGCTGGCAAGCAGCTGGAGGACGGCCGTACTCTCTCCGACTACAACATCCAGAA 5879 >seq2039 Length=254 Score = 84.2 bits (92), Expect = 5e-11 Identities = 79/101 (78%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 178011 CAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTC 178070 |||||||| || || |||||||||||||| || || ||||| || ||||| || || ||| Sbjct 252 CAGGACAAGGAGGGTATCCCTCCGGACCAACAGCGTCTTATTTTTGCCGGCAAGCAACTC 193 Query 178071 GAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGA 178111 || || || |||| ||| |||| || ||| |||| || || Sbjct 192 GAGGACGGTCGGACACTTTCCGACTACAACATCCAGAAGGA 152 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203514833454626