Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Magnaporthe_20sp._20MG07_20[genbank_20GCA_5F001936455.1_202017-01-
05] 14,029 sequences; 43,171,008 total letters
Query= NC_033775.1
Length=376207
Score E
Sequences producing significant alignments: (Bits) Value
seq13105 132 1e-25
seq13408 129 1e-24
seq11867 120 7e-22
seq2039 84.2 5e-11
>seq13105
Length=12360
Score = 132 bits (146), Expect = 1e-25
Identities = 153/205 (75%), Gaps = 1/205 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || ||||| || ||| | || || || || ||||| | ||||| || ||||||
Sbjct 12188 CAGATCTTCGTCAAGACTTTGACGGGCAAGACCATCACGTTGGAGGTCGAGTCTTCAGAC 12129
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || || || || ||| ||||| || ||||| || || || ||||||||||| ||
Sbjct 12128 ACGATTGACAATGTTAAATCCAAGATCCAAGACAAGGAGGGTATTCCTCCGGACCAACAG 12069
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
||||| |||||||| ||||| ||| | || |||||| | || || |||| || ||| ||
Sbjct 12068 CGACTGATCTTCGCTGGAAAGCAGTTGGAGGATGGACGCACGCTGTCCGACTACAACATC 12009
Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128
||||| ||||| || ||||| ||||
Sbjct 12008 CAAAAGGAATCTACTCTGCA-CTTG 11985
Score = 114 bits (126), Expect = 3e-20
Identities = 104/131 (79%), Gaps = 0/131 (0%)
Strand=Plus/Minus
Query 177981 GACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAG 178040
|| |||||||| |||||||| ||||| |||||||| || || || |||||||||||
Sbjct 12359 GATACCATCGACAACGTCAAGTCGAAGATCCAGGACAAGGAGGGTATTCCTCCGGACCAA 12300
Query 178041 CAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAAC 178100
||||| ||||| ||||| ||||| ||||| || || || |||| ||| |||| || |||
Sbjct 12299 CAACGCCTTATTTTCGCTGGAAAGCAGCTTGAGGACGGTCGGACCCTTTCCGACTACAAC 12240
Query 178101 GTCCAAAAAGA 178111
||||||| ||
Sbjct 12239 ATCCAAAAGGA 12229
>seq13408
Length=15383
Score = 129 bits (142), Expect = 1e-24
Identities = 144/191 (75%), Gaps = 6/191 (3%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA---AGCTCA 177980
|| || ||||| || || ||||| || || || |||||||| |||||||| |||
Sbjct 11500 CAGATCTTCGTCAAGACCCTCACGGGCAAGACTATCACCCTTGAGGTGGAGTCGAGC--- 11556
Query 177981 GACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAG 178040
||||||||||| || ||||| ||||| |||||||| || || ||||| |||||||||
Sbjct 11557 GACACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCAG 11616
Query 178041 CAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAAC 178100
|| || | ||||| ||||| || ||||| || || || ||||| || |||| || |||
Sbjct 11617 CAGCGCTTGATCTTTGCCGGCAAGCAGCTTGAGGACGGCAGGACCCTGTCCGACTACAAC 11676
Query 178101 GTCCAAAAAGA 178111
|||| || ||
Sbjct 11677 ATCCAGAAGGA 11687
>seq11867
Length=6080
Score = 120 bits (132), Expect = 7e-22
Identities = 134/179 (75%), Gaps = 0/179 (0%)
Strand=Plus/Plus
Query 177930 TTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATC 177989
|||||||| ||||| || || || || |||||| | ||||| || ||| ||||| |||
Sbjct 5701 TTCGTGAAGACTCTGACTGGCAAGACCATCACCTTGGAGGTCGAGTCCTCGGACACGATC 5760
Query 177990 GAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTT 178049
|| || || || |||||||||||||| || ||||| || || ||||| || || |||
Sbjct 5761 GACAATGTGAAGTCCAAGATTCAGGACAAGGAGGGAATTCCCCCTGACCAACAGCGTCTT 5820
Query 178050 ATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAA 178108
||||| || || || ||||| || || || | ||||| |||| || ||| |||| ||
Sbjct 5821 ATCTTTGCTGGCAAGCAGCTGGAGGACGGCCGTACTCTCTCCGACTACAACATCCAGAA 5879
>seq2039
Length=254
Score = 84.2 bits (92), Expect = 5e-11
Identities = 79/101 (78%), Gaps = 0/101 (0%)
Strand=Plus/Minus
Query 178011 CAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTC 178070
|||||||| || || |||||||||||||| || || ||||| || ||||| || || |||
Sbjct 252 CAGGACAAGGAGGGTATCCCTCCGGACCAACAGCGTCTTATTTTTGCCGGCAAGCAACTC 193
Query 178071 GAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGA 178111
|| || || |||| ||| |||| || ||| |||| || ||
Sbjct 192 GAGGACGGTCGGACACTTTCCGACTACAACATCCAGAAGGA 152
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1203514833454626
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |