Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20sp._20MG08_20[genbank_20GCA_5F001936555.1_202017-01- 05] 9,609 sequences; 39,560,686 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq9442 102 7e-17 seq9597 89.7 4e-13 >seq9442 Length=27348 Score = 102 bits (112), Expect = 7e-17 Identities = 150/210 (71%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 48518 ACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTC-GCTCGTCCTC 48576 || ||||| || |||||||||||||| |||||||| || | || ||| | ||||||| Sbjct 16279 ACCAAATGGAGGGTGCTCTCCTTTTGGATGTTGTAGTCGGA-AAGGGTCCGACCGTCCTC 16221 Query 48577 CAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCAT 48636 |||||||| || || |||| | || || || ||| || | || ||||||||| Sbjct 16220 AAGCTGCTTTCCAGCGAAAATAAGGCGTTGTTGGTCCGGAGGAATACCCTCCTTGTCCTG 16161 Query 48637 AATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTT 48696 || ||| ||| | | | |||||||||| ||||| ||| | || || || || Sbjct 16160 GATCTTCGACTTTACATTGTCGATGGTATCGGAGGACTCGACCTCCAAGGTAATCGTCTT 16101 Query 48697 ACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 || ||||| ||||| || ||||||||||| Sbjct 16100 GCCAGTGAGGGTTTTGACGAAAATCTGCAT 16071 >seq9597 Length=54142 Score = 89.7 bits (98), Expect = 4e-13 Identities = 145/205 (71%), Gaps = 4/205 (2%) Strand=Plus/Minus Query 48524 TGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTC--GCTCGTCCTCCAGCT 48581 || || ||||||||||| || |||||||| || | | | ||| || ||||||| |||| Sbjct 25056 TGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAC-AGGGTCCTGC-CGTCCTCAAGCT 24999 Query 48582 GCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTT 48641 |||| ||| | | || || |||||||| ||| || | || ||||||||| || | Sbjct 24998 GCTTGCCGGCAAAGATCAAGCGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCT 24939 Query 48642 TCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGG 48701 | ||||| | | ||||| ||| | |||||| ||| | || || || || || | Sbjct 24938 TGGACTTGACATTGTCGATGGTGTCGCTCGACTCCACCTCAAGGGTGATAGTCTTGCCCG 24879 Query 48702 TGAGAGTTTTCACAAAAATCTGCAT 48726 |||| || || || || |||||||| Sbjct 24878 TGAGGGTCTTGACGAAGATCTGCAT 24854 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421201867403609