Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Magnaporthe_20sp._20MG08_20[genbank_20GCA_5F001936555.1_202017-01-
05] 9,609 sequences; 39,560,686 total letters
Query= NC_008603.1
Length=321240
Score E
Sequences producing significant alignments: (Bits) Value
seq8305 100 6e-16
>seq8305
Length=9594
Score = 100 bits (110), Expect = 6e-16
Identities = 157/222 (71%), Gaps = 2/222 (1%)
Strand=Plus/Plus
Query 279345 GGTGAGGATCTGTGTGACTGTGATTTCTCGCTCGCATATGGTGGGAAGATTCTGCTAAAC 279404
|||||||| ||||| |||| ||||||||||| || |||| |||||||| || |||
Sbjct 1409 GGTGAGGACCTGTGCAACTGCACGTTCTCGCTCGCCTACGGTGCCAAGATTCTTCTCAAC 1468
Query 279405 TCTACCCGCCTCAACATCAAGCGTGGCAACCGGTATGGTCTCATCGGTCCCAATGGAGCG 279464
|||| ||| ||||||||||| | || || ||||| ||| ||||| || |
Sbjct 1469 CAGACCCATCTCCGTCTCAAGCGTGGCCAGCGTTACGGTCTTTGCGGCCCCAACGGTTCC 1528
Query 279465 GGTAAGAGCACTCTAATGCGCGCCATTGCAAACGGTCAGCTGGAAGGATTTCCTAACGCA 279524
|| ||| ||| || ||||||||||| |||| ||| | | ||| ||||| | |||
Sbjct 1529 GGAAAGTCCACCCTCATGCGCGCCATCAACAACGAGCAGGTCG-AGGGTTTCCCCAAGCA 1587
Query 279525 -TCTGAGGTAAGGACAGTGTATGTAGAGCACGACATCGACTC 279565
||||| | ||| || | || ||||||||| | |||||
Sbjct 1588 GAGCGAGGTCAAGACCGTCTTCGTCGAGCACGACCTTGACTC 1629
Score = 91.5 bits (100), Expect = 3e-13
Identities = 113/152 (74%), Gaps = 2/152 (1%)
Strand=Plus/Plus
Query 280672 CCAAGCTGGGTCTGGACCCCGAGTTTACAACTCACTCTCGCATTCGCGGTCTTTCTGGAG 280731
|||| | ||||| ||| ||||| | ||||||| ||||| || ||||| ||||| |
Sbjct 2781 CCAACTTTGGTCTCGACGCCGAGCTGGTTTCTCACTCGCGCATGCGTGGTCTGTCTGGTG 2840
Query 280732 GCCAGAAGGTCAAACTTGTCATCGGAGCA-GCTCTGTGGCAACACCCTCACGTGATCGTT 280790
| ||| ||||| | ||| | | || |||| |||||| | |||||| ||||||||
Sbjct 2841 GACAGCGTGTCAAGGTCGTCCTTGCCGCCTGCTC-GTGGCAGCGTCCTCACTTGATCGTT 2899
Query 280791 CTCGACGAGCCTACCAACTATCTGGACCGCGA 280822
|| || |||||||||||||| ||||||| ||
Sbjct 2900 CTTGATGAGCCTACCAACTACTTGGACCGTGA 2931
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1027710257551169
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |