Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Magnaporthe_20sp._20MG08_20[genbank_20GCA_5F001936555.1_202017-01-
05] 9,609 sequences; 39,560,686 total letters
Query= NC_009898.1
Length=368683
Score E
Sequences producing significant alignments: (Bits) Value
seq9442 125 2e-23
seq9597 118 3e-21
seq8642 98.7 2e-15
>seq9442
Length=27348
Score = 125 bits (138), Expect = 2e-23
Identities = 143/192 (74%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341
||| |||||||| || ||||||| ||||||||||| || || || || ||||| |||||
Sbjct 16490 TTCCTTTTGGATGTTGTAGTCGGACAGCGTGCGTCCATCCTCCAACTGCTTTCCAGCGAA 16431
Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401
|||||| |||||||| || || || || || || ||||| || | ||| || ||
Sbjct 16430 GATCAGTCGCTGTTGGTCCGGAGGAATACCCTCCTTGTCTTGGATCTTGGATTTAACATT 16371
Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461
|| || | || || || || || | |||||| ||||| || |||| |||||||||
Sbjct 16370 GTCAATCGTGTCTGAAGACTCGACCTCCAACGTGATGGTCTTGCCCGTCAAAGTCTTGAC 16311
Query 288462 GAATATCTGCAT 288473
||| ||||||||
Sbjct 16310 GAAGATCTGCAT 16299
Score = 114 bits (126), Expect = 3e-20
Identities = 151/208 (73%), Gaps = 1/208 (0%)
Strand=Plus/Minus
Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301
|||| ||||| ||||| | || ||||| || | || || || || ||||| || ||||
Sbjct 16073 CATG-CCACCACGGAGGCGGAGCACGAGGTGGAGAGTACTCTCCTTCTGGATGTTGTAGT 16015
Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361
||| || || || ||||| || | ||| || || || || || |||||||||||
Sbjct 16014 CGGAAAGTGTCCGACCGTCCTCGAGTTGCTTGCCGGCAAAAATAAGACGCTGTTGGTCCG 15955
Query 288362 CTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATT 288421
||||| || || || |||||||| |||| || ||||| || || | |||||| || |
Sbjct 15954 GAGGGATACCCTCCTTGTCCTGGATCTTCGACTTGACGTTGTCGATGGTATCGCTAGACT 15895
Query 288422 CTACTTCGAGCGTGATCGTCTTCCCGGT 288449
| || ||||| ||||| ||||| || ||
Sbjct 15894 CCACCTCGAGGGTGATGGTCTTGCCAGT 15867
Score = 96.9 bits (106), Expect = 8e-15
Identities = 136/191 (71%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
|| || || ||||| || || | || || ||||| || || | || || || || |||
Sbjct 16717 TCCTTCTGAATATTGTAATCAGACAGGGTTCGTCCATCCTCCAGCTGCTTGCCCGCAAAG 16658
Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402
|||| ||| ||||| | ||||| || || || || || || || | ||| |||||
Sbjct 16657 ATCAAACGTTGTTGGTCAGGCGGGATACCCTCCTTGTCTTGAATCTTTGATTTGACGTTG 16598
Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462
|| || | || ||||| |||||||| ||||| || || ||||| || |||||||||
Sbjct 16597 TCGATTGTGTCTGAAGATTCAACTTCGAGTGTGATGGTTTTGCCGGTAAGCGTCTTGACG 16538
Query 288463 AATATCTGCAT 288473
|| || |||||
Sbjct 16537 AAGATTTGCAT 16527
>seq9597
Length=54142
Score = 118 bits (130), Expect = 3e-21
Identities = 164/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| || || | || ||||| || | ||||| || || ||||| || |||||||
Sbjct 25080 CCACCACGCAGACGCAGCACGAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAC 25021
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| || | ||||| || | || || || || ||||||| ||||| || |||
Sbjct 25020 AGGGTCCTGCCGTCCTCAAGCTGCTTGCCGGCAAAGATCAAGCGCTGCTGGTCCGGGGGG 24961
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426
|| || || || |||||||| || | || || || || || | |||||||| || ||
Sbjct 24960 ATACCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGCTCGACTCCACC 24901
Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATTAT 288476
|| || ||||| ||||| || || || ||||||||||| |||||||| ||
Sbjct 24900 TCAAGGGTGATAGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCATGAT 24851
>seq8642
Length=12294
Score = 98.7 bits (108), Expect = 2e-15
Identities = 129/179 (72%), Gaps = 0/179 (0%)
Strand=Plus/Plus
Query 288286 TTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATC 288345
|| ||||| || ||||||| ||| || || ||||| || || || || || || |||||
Sbjct 6401 TTCTGGATGTTGTAGTCGGAGAGAGTACGGCCGTCCTCCAACTGCTTGCCAGCAAAGATA 6460
Query 288346 AGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCT 288405
||||||||||| | || ||||| || || ||||| || || | ||||| || ||
Sbjct 6461 AGACGCTGTTGGTCAGGGGGAATTCCCTCCTTGTCCTGAATCTTGGACTTCACATTGTCG 6520
Query 288406 ATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAA 288464
|| | || || || || || | ||||| ||||| || ||||||||||| |||||
Sbjct 6521 ATCGTGTCCGAGGACTCGACCTCCAAGGTGATGGTCTTGCCAGTCAGAGTCTTCACGAA 6579
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1179509166479902
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |