Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Magnaporthe_20sp._20MG08_20[genbank_20GCA_5F001936555.1_202017-01-
05] 9,609 sequences; 39,560,686 total letters
Query= NC_010240.1
Length=169794
Score E
Sequences producing significant alignments: (Bits) Value
seq9597 120 3e-22
seq9442 120 3e-22
>seq9597
Length=54142
Score = 120 bits (132), Expect = 3e-22
Identities = 156/216 (72%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 41993 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 42052
||||| ||| | || | ||||||||||| || || ||||| || | ||| |||| |
Sbjct 25069 ACGCAGCACGAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGACAGGGTCCTGCC 25010
Query 42053 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTT 42112
||| || |||||||| || || || || | ||||||||||| | || | | ||||||
Sbjct 25009 GTCCTCAAGCTGCTTGCCGGCAAAGATCAAGCGCTGCTGGTCCGGGGGGATACCCTCCTT 24950
Query 42113 GTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGAT 42172
|||| ||| || |||| | | | ||||||||||| ||||| || | |||||
Sbjct 24949 GTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGCTCGACTCCACCTCAAGGGTGAT 24890
Query 42173 GGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208
|| |||||||| || ||||| || ||||| |||||
Sbjct 24889 AGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 24854
>seq9442
Length=27348
Score = 120 bits (132), Expect = 3e-22
Identities = 146/194 (75%), Gaps = 4/194 (2%)
Strand=Plus/Minus
Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076
|||||| |||||||||||||||| ||| || || | || || |||||||| || || ||
Sbjct 16718 CTCCTTCTGAATATTGTAATCAGACAGGGTTCGTCCATCCTCCAGCTGCTTGCCCGCAAA 16659
Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCG 42135
|| | || || ||||| | || | | ||||||||| ||| | |||| ||||| ||
Sbjct 16658 GATCAAACGTTGTTGGTCAGGCGGGATACCCTCCTTGTCT-TGAATCTTTGATTTGA-CG 16601
Query 42136 TCGCC-ACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTT 42194
| | | | ||||| ||||| || |||| |||||||||||||| || ||||||||
Sbjct 16600 TTGTCGATTGTGTCTGAAGATTCAACTTCGAGTGTGATGGTTTTGCCGGTAAGCGTCTTG 16541
Query 42195 ACAAAGATTTGCAT 42208
|| |||||||||||
Sbjct 16540 ACGAAGATTTGCAT 16527
Score = 91.5 bits (100), Expect = 2e-13
Identities = 95/125 (76%), Gaps = 0/125 (0%)
Strand=Plus/Minus
Query 42000 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 42059
|||||||| | |||||||||||||| || ||||| || | || ||||| |||| ||
Sbjct 16279 ACCAAATGGAGGGTGCTCTCCTTTTGGATGTTGTAGTCGGAAAGGGTCCGACCGTCCTCA 16220
Query 42060 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATG 42119
|||||||| |||||||| || || || || ||||| | || | | |||||||||| |
Sbjct 16219 AGCTGCTTTCCAGCGAAAATAAGGCGTTGTTGGTCCGGAGGAATACCCTCCTTGTCCTGG 16160
Query 42120 ATTTT 42124
|| ||
Sbjct 16159 ATCTT 16155
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 543147553352560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |