Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20sp._20MG08_20[genbank_20GCA_5F001936555.1_202017-01- 05] 9,609 sequences; 39,560,686 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq9442 107 1e-18 seq9597 91.5 1e-13 >seq9442 Length=27348 Score = 107 bits (118), Expect = 1e-18 Identities = 139/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || |||||||| || || || || ||| ||||| |||| |||||||| || || ||||| Sbjct 16717 TCCTTCTGAATATTGTAATCAGACAGGGTTCGTCCATCCTCCAGCTGCTTGCCCGCAAAG 16658 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || | ||||| ||||| |||| | ||||||||||| |||||| ||||||| Sbjct 16657 ATCAAACGTTGTTGGTCAGGCGGGATACCCTCCTTGTCTTGAATCTTTGATTTGACGTTG 16598 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | || | || | ||||| |||| || |||||||| || || || ||||| || Sbjct 16597 TCGATTGTGTCTGAAGATTCAACTTCGAGTGTGATGGTTTTGCCGGTAAGCGTCTTGACG 16538 Query 34971 AAGATCTGCATA 34982 ||||| |||||| Sbjct 16537 AAGATTTGCATA 16526 Score = 89.7 bits (98), Expect = 3e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||||||| | || ||| || || ||||| ||||| || || | ||| |||| ||| Sbjct 16507 ACCAAGTGCAGAGTAGATTCCTTTTGGATGTTGTAGTCGGACAGCGTGCGTCCATCCTCC 16448 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 | ||| ||||| || || || ||||| || ||||| | || | ||||||||||| Sbjct 16447 AACTGCTTTCCAGCGAAGATCAGTCGCTGTTGGTCCGGAGGAATACCCTCCTTGTCTTGG 16388 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952 ||||| ||| || | |||| || | ||| || || | || ||||| || Sbjct 16387 ATCTTGGATTTAACATTGTCAATCGTGTCTGAAGACTCGACCTCCAACGTGATGGTCTTG 16328 Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 ||||| | |||||| || ||||||||||| Sbjct 16327 CCCGTCAAAGTCTTGACGAAGATCTGCAT 16299 Score = 86.0 bits (94), Expect = 4e-12 Identities = 148/213 (69%), Gaps = 8/213 (4%) Strand=Plus/Minus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 ||||| || | ||||| || || || ||||| ||||| |||||| | || | || || Sbjct 16279 ACCAAATGGAGGGTGCTCTCCTTTTGGATGTTGTAGTCGGAAAGGGTCCGACCGTCCTCA 16220 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 ||||| ||||| || || || || ||||| ||||| | || | ||||||||||| Sbjct 16219 AGCTGCTTTCCAGCGAAAATAAGGCGTTGTTGGTCCGGAGGAATACCCTCCTTGTCCTGG 16160 Query 34893 ATCTTCTGTTTGACGGATGCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGGT 34948 |||||| || || || | ||||| || || ||| || || | ||| || || Sbjct 16159 ATCTTCGACTTTAC--AT--TGTCGATGGTATCGGAGGACTCGACCTCCAAGGTAATCGT 16104 Query 34949 TTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 || || ||||| || || || || |||||||| Sbjct 16103 CTTGCCAGTGAGGGTTTTGACGAAAATCTGCAT 16071 >seq9597 Length=54142 Score = 91.5 bits (100), Expect = 1e-13 Identities = 142/201 (71%), Gaps = 8/201 (4%) Strand=Plus/Minus Query 34785 GTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCG 34844 ||||| || ||||| ||||| ||||| || ||| | | | || || ||||| || ||| Sbjct 25050 GTGCTCTCCTTCTGGATGTTGTAGTCGGACAGGGTCCTGCCGTCCTCAAGCTGCTTGCCG 24991 Query 34845 GCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTG 34904 ||||| || | || |||||||| | || | ||||||||||| ||||| ||| Sbjct 24990 GCAAAGATCAAGCGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTTGGACTTG 24931 Query 34905 ACGGATGCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAG 34960 || || | ||||| || | | ||| || || | ||| || || || |||||||| Sbjct 24930 AC--AT--TGTCGATGGTGTCGCTCGACTCCACCTCAAGGGTGATAGTCTTGCCCGTGAG 24875 Query 34961 AGTCTTCACAAAGATCTGCAT 34981 ||||| || ||||||||||| Sbjct 24874 GGTCTTGACGAAGATCTGCAT 24854 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324595582260552