Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Magnaporthe_20sp._20MG08_20[genbank_20GCA_5F001936555.1_202017-01-
05] 9,609 sequences; 39,560,686 total letters
Query= NC_017940.1
Length=127732
Score E
Sequences producing significant alignments: (Bits) Value
seq5842 113 4e-20
>seq5842
Length=2012
Score = 113 bits (124), Expect = 4e-20
Identities = 268/400 (67%), Gaps = 10/400 (3%)
Strand=Plus/Minus
Query 29989 ACGTAAAACTG---ACACATGGTGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTG 30045
||||||||||| | ||||| |||||||| || || |||| || | ||| |||
Sbjct 1076 ACGTAAAACTGCGCAAACATG---TGGCACGGCGGCAGGACCATAAGCTTGAGGTCCTTG 1020
Query 30046 GGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACG 30105
|||||||| || | | | ||||| | ||| | |||||| | | || || ||||
Sbjct 1019 GGGTTCCAAGCACTAAGAACCATGCGGCGGTCGTATGGGTTCGTGCGGAGCTTGTGCACG 960
Query 30106 GCGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTACTCT 30165
| | ||||| || || ||| |||| ||||||||| ||| ||||| ||
Sbjct 959 ACCTCGGCGAGCTGGTCGACGCCCTGGCCCGTGTAGTCTGCGTGGCAGTCGGTGTATTCG 900
Query 30166 GCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGC 30225
|| || || || | ||| ||||| ||||| || || |||||||| ||| | || | ||||
Sbjct 899 GCGCCAAAGTGGCGCCATTGGAAGCCGTAGACGGGGCCCAGGTCGCCCACCTCGCGGTGC 840
Query 30226 TCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCC- 30284
| || ||| | ||||| || || | | |||||| ||||||||||||| |||||
Sbjct 839 TGCAATCCCAGCCCGTCCAGGAACTCACGGCTGCCGTTGCCGTCCCAGATCTTGACCCCG 780
Query 30285 -CTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCA 30343
| || | || | ||| | | || | || ||||||||||||||||| |
Sbjct 779 GCGTCGCTCAG-GGGCTTCGCCG-ACGTCGCGCCCGACACGAACCACAGCAGCTCGAGGA 722
Query 30344 CGACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGG 30383
|||||| | | ||||| | ||| ||||| || || ||
Sbjct 721 TCACGGCCCGCGAGAAGACGCGCTTCGTCGTCAGCAGAGG 682
Score = 113 bits (124), Expect = 4e-20
Identities = 158/222 (71%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 29748 CCTGTTTATCCTCAGTGTGGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAGTCTTCAGCGG 29807
|||||| ||| || ||| || || || ||||| | ||| ||||| ||| || |
Sbjct 1398 CCTGTTGATCTCGAGCTCGGGGAACGGCCTCGGCTCGCGCTCCAGCTGCGTCCGGAGTGC 1339
Query 29808 TTCCACGTGATCCAGGTAGACGTGAGCGTCTCCCAGGGTGTGGACAAACTCTCCCGGTTC 29867
|| ||||| || |||||||||||| || |||| | ||| | | || || |
Sbjct 1338 GTCGACGTGGTCGGCGTAGACGTGAGCATCGCCCATGACGTGCGTCAGCGACCCGGGCAC 1279
Query 29868 TAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGG 29927
||| || ||| | | || ||||||| ||| || || | ||||||||| ||||| |||||
Sbjct 1278 TAGACCCGTGGCACGCGCAATCATGTGCGTCAGCAGTGCGTAGCTGGCAATGTTGAAGGG 1219
Query 29928 TACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACA 29969
|| || || |||||||| | ||||| |||||||||||| ||
Sbjct 1218 CACGCCTAGGCCCATGTCGCACGACCGCTGGTAGAGCTGGCA 1177
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 408569746920557
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |