Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Magnaporthe_20sp._20MG08_20[genbank_20GCA_5F001936555.1_202017-01-
05] 9,609 sequences; 39,560,686 total letters
Query= NC_027213.1
Length=214699
Score E
Sequences producing significant alignments: (Bits) Value
seq8085 141 1e-28
>seq8085
Length=8257
Score = 141 bits (156), Expect = 1e-28
Identities = 562/875 (64%), Gaps = 16/875 (2%)
Strand=Plus/Minus
Query 69352 ATAGTCCCCAGATTTTGCTGATTACTCTTTTTGTTACAGGCGTCCTTGTAAAGAATAAAC 69411
|| || || || || | ||| || ||||| ||| ||| |||||||| || || |||
Sbjct 5984 ATGGTACCAAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGATCCTTGTACAGCATGAAC 5925
Query 69412 GGAGTACCAGTTTCAATCTGAGATTCGATAATAGATTTCCAAACGACCCTAGCATTTATT 69471
|| ||||||| ||| |||||| || | || || | ||||| | || || ||
Sbjct 5924 GGGTTACCAGTCTCAGTCTGAGCCTCCAGGATGGAATACCAAAGTTTCTGGGCCTTGATC 5865
Query 69472 ACGGTCTTGTAACGCTTCTCT---TTTTCATA-TTGTG-TATATAGCCGTTCGAATTCAT 69526
|||||| || ||| | | ||||| || | || | |||| ||||| || |
Sbjct 5864 ---GTCTTGCGACCCTTACCGGCCTGCTCATACTTCTCATACAGAGCC--TCGAACTCTT 5810
Query 69527 CTCCCCAAACATCATCCAATCCAGGACATTCATTTGGACACATCAATGACCACACATCAT 69586
| || | || | | ||||| || || || || |||||||| | ||| | | |
Sbjct 5809 CACCGTAGCAGTCCGCGAGGCCAGGGCACTCGTTCGGGCACATCAAGGTCCAGTCGCCGT 5750
Query 69587 CATCCTTAACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAGAGATCTCTGG 69646
| || ||| || ||||| || ||||| || ||||||||||| | || || || | ||
Sbjct 5749 TTTTCTCAACGCGCTTCATGAACAGATCAGGGATCCAAAGAGCGAGGAACAGGTCACGGG 5690
Query 69647 TTCTATTTTCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCATAATATCAGAAT 69706
| | | || || ||||| || || | || ||||| ||||| | | ||| | |
Sbjct 5689 CACGAATCTCCTCCTTTCCGTGGTTCTTCCTTAGGTCGAGGAACTCGAAGACATCTGCGT 5630
Query 69707 GCCATGGTTCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGATCTATGT 69766
|||| || || || || || || | | | || || || || || || ||||| || | ||
Sbjct 5629 GCCACGGCTCAAGGTAGATGGCAAAGGCACCGGGGCGCTTGTTGCCACCCTGGTCGACGT 5570
Query 69767 ATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGATTTACCATTTG 69826
| | || ||||| || | || | |||||| |||| ||| || || || | || || |
Sbjct 5569 AGCGAGCTGTGTTGTTGAACACACGCAGCATGGGAACAATGCCGTTCGAGGTGCCGTTGG 5510
Query 69827 TTCCAGAAATATAACTTCCTCTTGCGCGAATATTACTAATAGATAGACCTATTCCTCCTG 69886
| || | ||||| || | || || || | | ||||| || || || |
Sbjct 5509 TACCGGCGATATAGGAGCCAGTGGCACGGATGCGATGGACGTTGAGACCGATACCGCCAG 5450
Query 69887 CCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATATACCCTCTATGCTATCAT 69946
|||| || ||||| | |||||| || | ||||| || || ||||| ||||| || |
Sbjct 5449 CCATCTTGGAGATCATGGCACAAGTCTTGAGGGTGTCGTAGATTCCCTCAATGCTGTCGT 5390
Query 69947 CTATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGTATAGTTCCCGCATTAAATA 70006
| |||| | || || || || |||| ||| || || || || || || |
Sbjct 5389 CCTTCATATCAACCAGGAAGCATGACGACAACTGAGCCTGCGGTGTGCCGGCGTTGAAAA 5330
Query 70007 ATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTGTATGTTTCAATAGCTG 70066
|| || || ||||| ||||| |||| ||| | || ||||| ||||| || ||
Sbjct 5329 GCGTCGGGGAGGCGTGTGTGAAGAATTTGCTAGACATAAGGTTGTAGGTTTCGATGACTC 5270
Query 70067 ATTCTAT-ATCCCACTGATGAATTCCTATCGCGACACGCATCAACATATGCTGAGGTCGT 70125
|| || | ||| | || |||| || |||||||| | ||| ||||| || |
Sbjct 5269 GCTCAATGTTGTCACCCCAG-ATACCTACAGCAACACGCATGATCATGTGCTGTGGCCTC 5211
Query 70126 TCTACCGTTTTATTATTTATTTTCAACAGGTATGATTTTTCCAGAGTTTTAAACCCAAAA 70185
|| || | || ||| | ||||| ||||| || | || ||||| || || || |||
Sbjct 5210 TCGACAATCTTGCCATTGAGCTTCAATAGGTAAGACCTCTCGAGAGTCTTGAAGCCGAAA 5151
Query 70186 TAGTTGTA--TGAAAAGTCTCTTTCGTAAATAATA 70218
|| | ||| ||||| || | ||||| | ||||
Sbjct 5150 TATTGGTAGTTGAAA--TCACGGTCGTAGACAATA 5118
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 686826293666760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |