Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Magnaporthe_20sp._20MG12_20[genbank_20GCA_5F001936955.1_202017-01-
05] 8,972 sequences; 41,157,244 total letters
Query= NC_001650.2
Length=184439
Score E
Sequences producing significant alignments: (Bits) Value
seq5175 127 2e-24
>seq5175
Length=2041
Score = 127 bits (140), Expect = 2e-24
Identities = 196/275 (71%), Gaps = 6/275 (2%)
Strand=Plus/Minus
Query 145995 GAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGAGTCCACGTACGCGGCCCCGAA 146054
||||||||| |||||||| ||| ||| |||| | | |||| ||| |||| || ||
Sbjct 981 GAGCTGGTCGACGCCCTGGCCCGTGTAGTCTGCGTGGCAGTCGGTGTATTCGGCGCCAAA 922
Query 146055 GTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTCCCTGTGCCCCAG-CC 146113
||| | ||| ||||| ||||||||||| |||||||| || ||| | |||| || ||
Sbjct 921 GTGGCGCCATTGGAAGCCGTAGACGGGGCCCAGGTCGCCCACCTCGCGGTGCTGCAATCC 862
Query 146114 CGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACGCC--CCTCGC 146171
| ||||| | ||||| || ||| |||||| |||||||||||||||| || | ||||
Sbjct 861 CAGCCCGTCC-AGGAACTCACGGCTGCCGTTGCCGTCCCAGATCTTGACCCCGGCGTCGC 803
Query 146172 GGAGAGCTCATTGGAGTCCGTGGACCCCCTGATGAACCAGAGCAGCTCTTCGAGGACCCC 146231
|| | || | ||| | ||| | |||||| |||||||| || || |
Sbjct 802 TCAGGG--GCTTCGCCGACGTCGCGCCCGACACGAACCACAGCAGCTCGAGGATCACGGC 745
Query 146232 CCTCCAGAAGACCCTCTTGGTGGTCAGCAGGGGGA 146266
|| | ||||||| | ||| || |||||||| ||||
Sbjct 744 CCGCGAGAAGACGCGCTTCGTCGTCAGCAGAGGGA 710
Score = 125 bits (138), Expect = 8e-24
Identities = 125/162 (77%), Gaps = 0/162 (0%)
Strand=Plus/Minus
Query 145690 TCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGACGTGGATGAAGTCCCCGGGCTCG 145749
|| ||||||| | ||||||||| || || |||| |||||| | | ||||||| |
Sbjct 1367 TCGACGTGGTCGGCGTAGACGTGAGCATCGCCCATGACGTGCGTCAGCGACCCGGGCACT 1308
Query 145750 AGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGC 145809
|| |||||| | || | ||||| |||||||| | ||||||||| ||||||||||||
Sbjct 1307 AGACCCGTGGCACGCGCAATCATGTGCGTCAGCAGTGCGTAGCTGGCAATGTTGAAGGGC 1248
Query 145810 ACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAG 145851
|| || || |||||||| | ||| |||||||| |||||||||
Sbjct 1247 ACGCCTAGGCCCATGTCGCACGACCGCTGGTAGAGCTGGCAG 1206
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 590010622886880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |