Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20sp._20MG12_20[genbank_20GCA_5F001936955.1_202017-01- 05] 8,972 sequences; 41,157,244 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq7975 190 3e-43 seq7291 87.8 2e-12 >seq7975 Length=12418 Score = 190 bits (210), Expect = 3e-43 Identities = 467/705 (66%), Gaps = 20/705 (3%) Strand=Plus/Plus Query 63020 AGTCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTC 63079 || ||||| || || | ||| |||||||| | ||| || |||| | || || || ||| Sbjct 2466 AGGCCAGGGCACTCGTTCGGGCACATCAAGGTCCAGTCGCCGTTTTTCTCAACGCGCTTC 2525 Query 63080 ATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTT 63139 || || |||||||| ||||||||||| | || || || | || | | ||||| ||| Sbjct 2526 ATGAACAGATCAGGGATCCAAAGAGCGAGGAACAGGTCACGGGCACGAATCTCCTCCTTT 2585 Query 63140 CCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTAT 63199 || ||||| | || ||||||||| | | | ||| | |||||||| || | ||| Sbjct 2586 CCGTGGTTCTTCCTTAGGTCGAGGAACTCGAAGACATCTGCGTGCCACGGCTCAAGGTAG 2645 Query 63200 ATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTA 63259 ||||| | | || || || ||||| || ||||| || | ||| | ||| ||||| || Sbjct 2646 ATGGCAAAGGCACCGGGGCGCTTGTTGCCACCCTGGTCGACGTAGCGAGCTGTGTTGTTG 2705 Query 63260 TAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCTGAGATATAGCTT 63319 | || | || ||| |||| ||| || || || || || ||||| || | ||||||| Sbjct 2706 AACACACGCAGCATGGGAACAATGCCGTTCGAGGTGCCGTTGGTACCGGCGATATAGGAG 2765 Query 63320 CCACTGGCACGAATATTACTAA--TTGATAGACCTATTCCCCCTGCCATTTTAGAGATTA 63377 ||| ||||||| || | | ||| ||||| || || || ||||| || ||||| | Sbjct 2766 CCAGTGGCACGGATGCGATGGACGTTG--AGACCGATACCGCCAGCCATCTTGGAGATCA 2823 Query 63378 ATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTA 63437 || || || | || || ||||| || || || || || ||| |||| | || | Sbjct 2824 TGGCACAAGTCTTGAGGGTGTCGTAGATTCCTTCAATGCTGTCGTCCTTCATATCAACCA 2883 Query 63438 GAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGT 63497 | || || |||| || | || || || || || | || || || |||| Sbjct 2884 GGAAGCATGACGACAACTGAGCCTGCGGTGTGCCGGCGTTGAAAAGCGTCGGGGAGGCGT 2943 Query 63498 GAGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTAT------AT 63551 | || || |||| ||| | || ||||| || || || || || || | Sbjct 2944 GTGTGAAGAATTTGCTAGACATAAGGTTGTAGGTTTCGATGACTCGCTCAATGTTGTCAC 3003 Query 63552 CCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCT 63611 |||| || ||||| || |||||||| | ||||||||| || || || || |||| Sbjct 3004 CCCA------GATACCTACAGCAACACGCATGATCATGTGCTGTGGCCTCTCGACAATCT 3057 Query 63612 TGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA-- 63669 || || | ||||| | ||| || | || | ||| || || || ||||| | ||| Sbjct 3058 TGCCATTGAGCTTCAATAGGTAAGACCTCTCGAGAGTCTTGAAGCCGAAATATTGGTAGT 3117 Query 63670 TGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTT 63714 ||||| || || ||||| | |||| | |||| ||| | ||||| Sbjct 3118 TGAAA--TCACGGTCGTAGACAATAGCTGAGTCGAGATCCTCCTT 3160 >seq7291 Length=7850 Score = 87.8 bits (96), Expect = 2e-12 Identities = 172/254 (68%), Gaps = 3/254 (1%) Strand=Plus/Minus Query 32958 TCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAGCATCTAGCCTCGGTAATC 33017 || || |||||||| || || || || || ||||||||||| | ||||||| |||| Sbjct 6952 TCGGAGTGAATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCAACGGGCCTCGGGAATC 6893 Query 33018 TGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCA 33077 || ||||| | | ||||| || | | || || || || || || ||| || || Sbjct 6892 TGGACTTCGGCGCTGAATCGCTCAACGAGGTTCTCGTTGACGATGCCATCAGAAGCGGCG 6833 Query 33078 AAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAG---TTTATTCCAA 33134 || || || | | ||| || || || ||||| || ||| || || ||||| Sbjct 6832 AAGAATGCAAGGATGTGTGAGATGAAGTACTTTTCATCATCTGTGAGCTTGTTGTTCCAG 6773 Query 33135 TCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTT 33194 || | || ||| || || | ||| | ||||| | ||||| ||||| ||||| ||||| Sbjct 6772 TCGTGGAGATCCTTGGACAAATCAATCTCTTCGGCCGTCCAGAATGAGGCCTCGGCCTTC 6713 Query 33195 TTATACATATTCCA 33208 || ||||| | ||| Sbjct 6712 TTGTACATCTGCCA 6699 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633560938171200