Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Magnaporthe_20sp._20MG12_20[genbank_20GCA_5F001936955.1_202017-01-
05] 8,972 sequences; 41,157,244 total letters
Query= NC_008603.1
Length=321240
Score E
Sequences producing significant alignments: (Bits) Value
seq7489 100 6e-16
>seq7489
Length=8831
Score = 100 bits (110), Expect = 6e-16
Identities = 157/222 (71%), Gaps = 2/222 (1%)
Strand=Plus/Minus
Query 279345 GGTGAGGATCTGTGTGACTGTGATTTCTCGCTCGCATATGGTGGGAAGATTCTGCTAAAC 279404
|||||||| ||||| |||| ||||||||||| || |||| |||||||| || |||
Sbjct 7413 GGTGAGGACCTGTGCAACTGCACGTTCTCGCTCGCCTACGGTGCCAAGATTCTTCTCAAC 7354
Query 279405 TCTACCCGCCTCAACATCAAGCGTGGCAACCGGTATGGTCTCATCGGTCCCAATGGAGCG 279464
|||| ||| ||||||||||| | || || ||||| ||| ||||| || |
Sbjct 7353 CAGACCCATCTCCGTCTCAAGCGTGGCCAGCGTTACGGTCTTTGCGGCCCCAACGGTTCC 7294
Query 279465 GGTAAGAGCACTCTAATGCGCGCCATTGCAAACGGTCAGCTGGAAGGATTTCCTAACGCA 279524
|| ||| ||| || ||||||||||| |||| ||| | || || || || || |||
Sbjct 7293 GGAAAGTCCACCCTCATGCGCGCCATCAACAACGAGCAGGTCGAGGGCTTCCCCAA-GCA 7235
Query 279525 -TCTGAGGTAAGGACAGTGTATGTAGAGCACGACATCGACTC 279565
||||| | ||| || | || ||||||||| | |||||
Sbjct 7234 GAGCGAGGTCAAGACCGTCTTCGTCGAGCACGACCTTGACTC 7193
Score = 91.5 bits (100), Expect = 3e-13
Identities = 113/152 (74%), Gaps = 2/152 (1%)
Strand=Plus/Minus
Query 280672 CCAAGCTGGGTCTGGACCCCGAGTTTACAACTCACTCTCGCATTCGCGGTCTTTCTGGAG 280731
|||| | ||||| ||| ||||| | ||||||| ||||| || ||||| ||||| |
Sbjct 6041 CCAACTTTGGTCTCGACGCCGAGCTGGTTTCTCACTCGCGCATGCGTGGTCTGTCTGGTG 5982
Query 280732 GCCAGAAGGTCAAACTTGTCATCGGAGCA-GCTCTGTGGCAACACCCTCACGTGATCGTT 280790
| ||| ||||| | ||| | | || |||| |||||| | |||||| ||||||||
Sbjct 5981 GACAGCGTGTCAAGGTCGTCCTTGCCGCCTGCTC-GTGGCAGCGTCCTCACTTGATCGTT 5923
Query 280791 CTCGACGAGCCTACCAACTATCTGGACCGCGA 280822
|| || |||||||||||||| ||||||| ||
Sbjct 5922 CTTGATGAGCCTACCAACTACTTGGACCGTGA 5891
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1027718646305452
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |