Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20sp._20MG12_20[genbank_20GCA_5F001936955.1_202017-01- 05] 8,972 sequences; 41,157,244 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq8951 134 9e-27 seq8593 111 1e-19 >seq8951 Length=50731 Score = 134 bits (148), Expect = 9e-27 Identities = 163/220 (74%), Gaps = 8/220 (4%) Strand=Plus/Plus Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824 ||| || ||||| | ||||||||||||||| ||||| ||||| || ||| | | | || Sbjct 25653 CAGCACGAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGGGTCCTGCCGTC 25712 Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 || || ||||| ||||| ||||||| || |||||||| | || | ||||||||||| Sbjct 25713 CTCAAGCTGCTTGCCGGCAAAGATCAAGCGCTGCTGGTCCGGGGGGATACCCTCCTTGTC 25772 Query 34885 GTTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTA 34940 | || || ||||| || | ||||| || | | ||| || |||| ||| | Sbjct 25773 CTGGATCTTGGACTTGAC--AT--TGTCGATGGTGTCGCTCGACTCCACCTCAAGGGTGA 25828 Query 34941 TGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATGAT 34980 | ||||| |||||||||||||| || |||||||||||||| Sbjct 25829 TAGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCATGAT 25868 >seq8593 Length=21612 Score = 111 bits (122), Expect = 1e-19 Identities = 156/217 (72%), Gaps = 8/217 (4%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||||| || | |||||||||||| || ||||| ||||| || ||| | || | || Sbjct 10548 AGGACCAAATGGAGGGTGCTCTCCTTTTGGATGTTGTAGTCGGAAAGGGTCCGACCGTCC 10489 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || |||||||| ||||| || || ||||| ||||| | || | ||||||||||| Sbjct 10488 TCAAGCTGCTTTCCAGCGAAAATAAGGCGTTGTTGGTCCGGAGGAATACCCTCCTTGTCC 10429 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTAT 34941 | || || || || || | ||||| || || |||||| || | ||| || Sbjct 10428 TGGATCTTCGACTTTAC--AT--TGTCGATGGTATCGGAGGACTCGACCTCCAAGGTAAT 10373 Query 34942 GGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 ||||| || |||||||| || || || ||||||||| Sbjct 10372 CGTCTTGCCAGTGAGGGTTTTGACGAAAATCTGCATG 10336 Score = 107 bits (118), Expect = 1e-18 Identities = 152/214 (71%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824 |||||||| ||| | || ||||| || ||||| ||||| || || |||| |||| Sbjct 10777 CAGGACCAAGTGCAGAGTAGATTCCTTTTGGATGTTGTAGTCGGACAGCGTGCGTCCATC 10718 Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 |||| |||||||| |||||||||||||| || ||||| | || | |||||||| || Sbjct 10717 CTCCAACTGCTTTCCAGCGAAGATCAGTCGCTGTTGGTCCGGAGGAATACCCTCCTTATC 10658 Query 34885 GTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGT 34944 | || || ||| || | |||| || | |||||| || | || ||||| Sbjct 10657 TTGGATCTTGGATTTAACATTGTCAATCGTGTCTGAAGACTCGACCTCCAACGTGATGGT 10598 Query 34945 CTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 ||| ||||| | ||||| || |||||||||||| Sbjct 10597 CTTGCCCGTCAAAGTCTTGACGAAGATCTGCATG 10564 Score = 95.1 bits (104), Expect = 8e-15 Identities = 136/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 |||||||||||| || || || || ||| | || |||| ||||| ||||| || || || Sbjct 10984 CTCCTTCTGAATATTGTAATCAGACAGGGTTCGTCCATCCTCCAGCTGCTTGCCCGCAAA 10925 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 ||||| ||||| ||||| |||| | ||||||||||| | || ||| ||||||| Sbjct 10924 GATCAAGCGTTGTTGGTCAGGCGGGATACCCTCCTTGTCTTGAATCTTTGATTTGACGTT 10865 Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965 | || | || | || || || | || ||||| || || || || ||||| || Sbjct 10864 GTCGATTGTGTCTGAAGATTCAACTTCGAGTGTGATGGTTTTGCCGGTAAGCGTCTTGAC 10805 Query 34966 AAAGATCTGCAT 34977 ||||| ||||| Sbjct 10804 GAAGATTTGCAT 10793 Score = 86.0 bits (94), Expect = 4e-12 Identities = 133/190 (70%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || || ||||||| || ||||||||||| ||||| ||||| || || | || | || Sbjct 10320 AGCACGAGGTGAAGAGTACTCTCCTTCTGGATGTTGTAGTCGGAAAGTGTCCGACCGTCC 10261 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || |||||||| ||||| || || || || || ||||| | || | ||||||||||| Sbjct 10260 TCGAGTTGCTTGCCGGCAAAAATAAGACGCTGTTGGTCCGGAGGGATACCCTCCTTGTCC 10201 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || |||||| | || | || | | ||| || || | ||| |||||| Sbjct 10200 TGGATCTTCGACTTGACGTTGTCGATGGTATCGCTAGACTCCACCTCGAGGGTGATGGTC 10141 Query 34946 TTTCCCGTGA 34955 || || |||| Sbjct 10140 TTGCCAGTGA 10131 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325657186713668