Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20sp._20MG12_20[genbank_20GCA_5F001936955.1_202017-01- 05] 8,972 sequences; 41,157,244 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq8951 120 2e-22 seq8593 100 2e-16 >seq8951 Length=50731 Score = 120 bits (132), Expect = 2e-22 Identities = 166/230 (72%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 33521 CACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGG 33580 ||||||| | || ||| | ||| | || || |||||||| || || |||||||| |||| Sbjct 25637 CACCACCACGCAGACGCAGCACGAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGG 25696 Query 33581 AGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCG 33640 |||| || | |||| || | || || |||||||| ||||| |||||||| || | | Sbjct 25697 AGAGGGTCCTGCCGTCCTCAAGCTGCTTGCCGGCAAAGATCAAGCGCTGCTGGTCCGGGG 25756 Query 33641 GCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCC 33699 | | ||| || ||||| || || || | ||| ||| | ||||||||| || ||| Sbjct 25757 GGATACCCTCCTTGTCCTGGATCTTGGACTTGA-CATTGTCGATGGTGTCGCTCGACTCC 25815 Query 33700 ACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || |||| ||||| || || || || | || || || ||||||||||| Sbjct 25816 ACCTCAAGGGTGATAGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 25865 >seq8593 Length=21612 Score = 100 bits (110), Expect = 2e-16 Identities = 161/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | || ||| | ||||| || ||||| || ||||| |||||||| ||||| Sbjct 10792 ACCACCACGCAGACGCAGGACCAAGTGCAGAGTAGATTCCTTTTGGATGTTGTAGTCGGA 10733 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 || |||||| | || ||||| || ||||| || || |||| ||||| || || | || Sbjct 10732 CAGCGTGCGTCCATCCTCCAACTGCTTTCCAGCGAAGATCAGTCGCTGTTGGTCCGGAGG 10673 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCACG-GTGTCGCTTGATTCCA 33700 | ||| || || || || || ||| ||||| |||| ||||| || || | Sbjct 10672 AATACCCTCCTTATCTTGGATCTTGGATTT-AACATTGTCAATCGTGTCTGAAGACTCGA 10614 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | || | |||||| || || || || || || || || ||||||||||| Sbjct 10613 CCTCCAACGTGATGGTCTTGCCCGTCAAAGTCTTGACGAAGATCTGCAT 10565 Score = 87.8 bits (96), Expect = 1e-12 Identities = 129/180 (72%), Gaps = 2/180 (1%) Strand=Plus/Minus Query 33547 TGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGT 33606 || ||||| ||||| || || |||||||| ||||| ||||| || |||| || | ||| Sbjct 10311 TGAAGAGTACTCTCCTTCTGGATGTTGTAGTCGGAAAGTGTCCGACCGTCCTCGAGTTGC 10252 Query 33607 TTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTC 33666 || ||||||||||| | |||||| || || | || | ||| || ||||| || ||| Sbjct 10251 TTGCCGGCAAAAATAAGACGCTGTTGGTCCGGAGGGATACCCTCCTTGTCCTGGATCTTC 10192 Query 33667 TGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGT 33725 | | || | ||| | ||| ||||| || ||||| || | ||||| || || || || Sbjct 10191 -GACTTGACGTTGTCGATGGTATCGCTAGACTCCACCTCGAGGGTGATGGTCTTGCCAGT 10133 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328668057450240